Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.53■□□□□ 0.56
ARHGEF39Q8N4T4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ARHGEF39Q8N4T4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ARHGEF39Q8N4T4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
ARHGEF39Q8N4T4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ARHGEF39Q8N4T4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ARHGEF39Q8N4T4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ARHGEF39Q8N4T4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
ARHGEF39Q8N4T4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
ARHGEF39Q8N4T4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
ARHGEF39Q8N4T4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ARHGEF39Q8N4T4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ARHGEF39Q8N4T4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.53■□□□□ 0.56
ARHGEF39Q8N4T4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.53■□□□□ 0.56
ARHGEF39Q8N4T4 MIR4497-201ENST00000583208 89 ntBASIC18.53■□□□□ 0.56
ARHGEF39Q8N4T4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
ARHGEF39Q8N4T4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.53■□□□□ 0.56
ARHGEF39Q8N4T4 AC073195.1-201ENST00000607241 877 ntBASIC18.53■□□□□ 0.56
ARHGEF39Q8N4T4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ARHGEF39Q8N4T4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ARHGEF39Q8N4T4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ARHGEF39Q8N4T4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ARHGEF39Q8N4T4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
ARHGEF39Q8N4T4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.53■□□□□ 0.56
ARHGEF39Q8N4T4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ARHGEF39Q8N4T4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
ARHGEF39Q8N4T4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ARHGEF39Q8N4T4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ARHGEF39Q8N4T4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.52■□□□□ 0.56
ARHGEF39Q8N4T4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.52■□□□□ 0.56
ARHGEF39Q8N4T4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ARHGEF39Q8N4T4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.52■□□□□ 0.56
ARHGEF39Q8N4T4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.52■□□□□ 0.56
ARHGEF39Q8N4T4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ARHGEF39Q8N4T4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.52■□□□□ 0.56
ARHGEF39Q8N4T4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ARHGEF39Q8N4T4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ARHGEF39Q8N4T4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ARHGEF39Q8N4T4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ARHGEF39Q8N4T4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ARHGEF39Q8N4T4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ARHGEF39Q8N4T4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ARHGEF39Q8N4T4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
ARHGEF39Q8N4T4 SNORA78-201ENST00000459373 127 ntBASIC18.52■□□□□ 0.56
ARHGEF39Q8N4T4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ARHGEF39Q8N4T4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.52■□□□□ 0.56
ARHGEF39Q8N4T4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
ARHGEF39Q8N4T4 AP001412.1-201ENST00000608405 714 ntBASIC18.52■□□□□ 0.56
ARHGEF39Q8N4T4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.52■□□□□ 0.56
ARHGEF39Q8N4T4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ARHGEF39Q8N4T4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ARHGEF39Q8N4T4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
ARHGEF39Q8N4T4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ARHGEF39Q8N4T4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.52■□□□□ 0.55
ARHGEF39Q8N4T4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ARHGEF39Q8N4T4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ARHGEF39Q8N4T4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
ARHGEF39Q8N4T4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.51■□□□□ 0.55
ARHGEF39Q8N4T4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ARHGEF39Q8N4T4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.51■□□□□ 0.55
ARHGEF39Q8N4T4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.51■□□□□ 0.55
ARHGEF39Q8N4T4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.51■□□□□ 0.55
ARHGEF39Q8N4T4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ARHGEF39Q8N4T4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
ARHGEF39Q8N4T4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ARHGEF39Q8N4T4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ARHGEF39Q8N4T4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ARHGEF39Q8N4T4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.51■□□□□ 0.55
ARHGEF39Q8N4T4 KSR1P1-201ENST00000446298 240 ntBASIC18.51■□□□□ 0.55
ARHGEF39Q8N4T4 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.51■□□□□ 0.55
ARHGEF39Q8N4T4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ARHGEF39Q8N4T4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.51■□□□□ 0.55
ARHGEF39Q8N4T4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.51■□□□□ 0.55
ARHGEF39Q8N4T4 AL445675.2-201ENST00000620291 557 ntBASIC18.51■□□□□ 0.55
ARHGEF39Q8N4T4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.51■□□□□ 0.55
ARHGEF39Q8N4T4 HLA-A-209ENST00000638375 975 ntBASIC18.51■□□□□ 0.55
ARHGEF39Q8N4T4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ARHGEF39Q8N4T4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
ARHGEF39Q8N4T4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ARHGEF39Q8N4T4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.51■□□□□ 0.55
ARHGEF39Q8N4T4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ARHGEF39Q8N4T4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ARHGEF39Q8N4T4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 AC073130.3-201ENST00000624389 2278 ntBASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 TSPY7P-201ENST00000431358 1114 ntBASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 AP002982.1-201ENST00000492365 877 ntBASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ARHGEF39Q8N4T4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms