Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST3H2BBQ8N257 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
HIST3H2BBQ8N257 AL645608.8-201ENST00000606034 2086 ntBASIC14.67□□□□□ -0.06
HIST3H2BBQ8N257 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC14.67□□□□□ -0.06
HIST3H2BBQ8N257 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST3H2BBQ8N257 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST3H2BBQ8N257 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.67□□□□□ -0.06
HIST3H2BBQ8N257 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
HIST3H2BBQ8N257 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST3H2BBQ8N257 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST3H2BBQ8N257 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HIST3H2BBQ8N257 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
HIST3H2BBQ8N257 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST3H2BBQ8N257 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HIST3H2BBQ8N257 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST3H2BBQ8N257 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HIST3H2BBQ8N257 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HIST3H2BBQ8N257 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
HIST3H2BBQ8N257 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST3H2BBQ8N257 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST3H2BBQ8N257 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
HIST3H2BBQ8N257 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
HIST3H2BBQ8N257 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST3H2BBQ8N257 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST3H2BBQ8N257 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HIST3H2BBQ8N257 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HIST3H2BBQ8N257 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST3H2BBQ8N257 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HIST3H2BBQ8N257 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HIST3H2BBQ8N257 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST3H2BBQ8N257 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST3H2BBQ8N257 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HIST3H2BBQ8N257 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST3H2BBQ8N257 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST3H2BBQ8N257 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC14.66□□□□□ -0.06
HIST3H2BBQ8N257 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HIST3H2BBQ8N257 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
HIST3H2BBQ8N257 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC14.66□□□□□ -0.06
HIST3H2BBQ8N257 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST3H2BBQ8N257 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST3H2BBQ8N257 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST3H2BBQ8N257 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.66□□□□□ -0.06
HIST3H2BBQ8N257 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST3H2BBQ8N257 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST3H2BBQ8N257 MFF-207ENST00000409565 1548 ntTSL 2 BASIC14.66□□□□□ -0.06
HIST3H2BBQ8N257 BX005040.4-201ENST00000637145 1518 ntBASIC14.66□□□□□ -0.06
HIST3H2BBQ8N257 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST3H2BBQ8N257 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST3H2BBQ8N257 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
HIST3H2BBQ8N257 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HIST3H2BBQ8N257 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.65□□□□□ -0.06
HIST3H2BBQ8N257 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC14.65□□□□□ -0.06
HIST3H2BBQ8N257 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HIST3H2BBQ8N257 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST3H2BBQ8N257 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC14.65□□□□□ -0.06
HIST3H2BBQ8N257 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST3H2BBQ8N257 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.65□□□□□ -0.06
HIST3H2BBQ8N257 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.65□□□□□ -0.06
HIST3H2BBQ8N257 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST3H2BBQ8N257 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST3H2BBQ8N257 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC14.65□□□□□ -0.06
HIST3H2BBQ8N257 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC14.65□□□□□ -0.06
HIST3H2BBQ8N257 AP006261.1-201ENST00000584783 668 ntBASIC14.65□□□□□ -0.06
HIST3H2BBQ8N257 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HIST3H2BBQ8N257 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HIST3H2BBQ8N257 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC14.65□□□□□ -0.06
HIST3H2BBQ8N257 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST3H2BBQ8N257 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST3H2BBQ8N257 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST3H2BBQ8N257 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST3H2BBQ8N257 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.65□□□□□ -0.06
HIST3H2BBQ8N257 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
HIST3H2BBQ8N257 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HIST3H2BBQ8N257 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST3H2BBQ8N257 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.65□□□□□ -0.06
HIST3H2BBQ8N257 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
HIST3H2BBQ8N257 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
HIST3H2BBQ8N257 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
HIST3H2BBQ8N257 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST3H2BBQ8N257 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST3H2BBQ8N257 AF131216.4-201ENST00000638924 1588 ntBASIC14.64□□□□□ -0.07
HIST3H2BBQ8N257 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST3H2BBQ8N257 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
HIST3H2BBQ8N257 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST3H2BBQ8N257 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.64□□□□□ -0.07
HIST3H2BBQ8N257 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST3H2BBQ8N257 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.64□□□□□ -0.07
HIST3H2BBQ8N257 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST3H2BBQ8N257 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST3H2BBQ8N257 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST3H2BBQ8N257 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST3H2BBQ8N257 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST3H2BBQ8N257 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST3H2BBQ8N257 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
HIST3H2BBQ8N257 NKILA-202ENST00000614771 2598 ntBASIC14.64□□□□□ -0.07
HIST3H2BBQ8N257 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HIST3H2BBQ8N257 AC134043.2-201ENST00000624206 2238 ntBASIC14.64□□□□□ -0.07
HIST3H2BBQ8N257 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HIST3H2BBQ8N257 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
HIST3H2BBQ8N257 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms