Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXR1Q6PIV2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.34■□□□□ 0.85
FOXR1Q6PIV2 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC20.34■□□□□ 0.85
FOXR1Q6PIV2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.34■□□□□ 0.85
FOXR1Q6PIV2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
FOXR1Q6PIV2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXR1Q6PIV2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXR1Q6PIV2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
FOXR1Q6PIV2 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXR1Q6PIV2 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXR1Q6PIV2 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
FOXR1Q6PIV2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
FOXR1Q6PIV2 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXR1Q6PIV2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXR1Q6PIV2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
FOXR1Q6PIV2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.34■□□□□ 0.85
FOXR1Q6PIV2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.34■□□□□ 0.85
FOXR1Q6PIV2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.34■□□□□ 0.85
FOXR1Q6PIV2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXR1Q6PIV2 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXR1Q6PIV2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
FOXR1Q6PIV2 AC068338.2-201ENST00000563278 1430 ntBASIC20.34■□□□□ 0.85
FOXR1Q6PIV2 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
FOXR1Q6PIV2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXR1Q6PIV2 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FOXR1Q6PIV2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FOXR1Q6PIV2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FOXR1Q6PIV2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.33■□□□□ 0.85
FOXR1Q6PIV2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
FOXR1Q6PIV2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FOXR1Q6PIV2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.33■□□□□ 0.85
FOXR1Q6PIV2 POU5F1P3-201ENST00000428824 1078 ntBASIC20.33■□□□□ 0.85
FOXR1Q6PIV2 AC073210.2-201ENST00000430369 194 ntBASIC20.33■□□□□ 0.85
FOXR1Q6PIV2 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.33■□□□□ 0.85
FOXR1Q6PIV2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.33■□□□□ 0.85
FOXR1Q6PIV2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.33■□□□□ 0.85
FOXR1Q6PIV2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
FOXR1Q6PIV2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
FOXR1Q6PIV2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
FOXR1Q6PIV2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.33■□□□□ 0.84
FOXR1Q6PIV2 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
FOXR1Q6PIV2 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
FOXR1Q6PIV2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
FOXR1Q6PIV2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
FOXR1Q6PIV2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
FOXR1Q6PIV2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXR1Q6PIV2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
FOXR1Q6PIV2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXR1Q6PIV2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.32■□□□□ 0.84
FOXR1Q6PIV2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
FOXR1Q6PIV2 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FOXR1Q6PIV2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.32■□□□□ 0.84
FOXR1Q6PIV2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
FOXR1Q6PIV2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.32■□□□□ 0.84
FOXR1Q6PIV2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
FOXR1Q6PIV2 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.32■□□□□ 0.84
FOXR1Q6PIV2 AC016405.3-201ENST00000607710 860 ntBASIC20.32■□□□□ 0.84
FOXR1Q6PIV2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
FOXR1Q6PIV2 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.32■□□□□ 0.84
FOXR1Q6PIV2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
FOXR1Q6PIV2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXR1Q6PIV2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
FOXR1Q6PIV2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXR1Q6PIV2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXR1Q6PIV2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.32■□□□□ 0.84
FOXR1Q6PIV2 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.32■□□□□ 0.84
FOXR1Q6PIV2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
FOXR1Q6PIV2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FOXR1Q6PIV2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXR1Q6PIV2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
FOXR1Q6PIV2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
FOXR1Q6PIV2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
FOXR1Q6PIV2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXR1Q6PIV2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
FOXR1Q6PIV2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.31■□□□□ 0.84
FOXR1Q6PIV2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FOXR1Q6PIV2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.31■□□□□ 0.84
FOXR1Q6PIV2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXR1Q6PIV2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.31■□□□□ 0.84
FOXR1Q6PIV2 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.31■□□□□ 0.84
FOXR1Q6PIV2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXR1Q6PIV2 AL034346.1-201ENST00000568244 1277 ntBASIC20.31■□□□□ 0.84
FOXR1Q6PIV2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.31■□□□□ 0.84
FOXR1Q6PIV2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXR1Q6PIV2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXR1Q6PIV2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.31■□□□□ 0.84
FOXR1Q6PIV2 AC092720.2-201ENST00000602388 1665 ntBASIC20.31■□□□□ 0.84
FOXR1Q6PIV2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXR1Q6PIV2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXR1Q6PIV2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXR1Q6PIV2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXR1Q6PIV2 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.3■□□□□ 0.84
FOXR1Q6PIV2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXR1Q6PIV2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.3■□□□□ 0.84
FOXR1Q6PIV2 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXR1Q6PIV2 AC139713.2-201ENST00000641328 2723 ntBASIC20.3■□□□□ 0.84
FOXR1Q6PIV2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.3■□□□□ 0.84
FOXR1Q6PIV2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FOXR1Q6PIV2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.3■□□□□ 0.84
FOXR1Q6PIV2 AC093787.1-201ENST00000450396 207 ntBASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms