Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.44■□□□□ 0.7
ZNF549Q6P9A3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.44■□□□□ 0.7
ZNF549Q6P9A3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
ZNF549Q6P9A3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF549Q6P9A3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.44■□□□□ 0.7
ZNF549Q6P9A3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF549Q6P9A3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF549Q6P9A3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF549Q6P9A3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.44■□□□□ 0.7
ZNF549Q6P9A3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF549Q6P9A3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
ZNF549Q6P9A3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ZNF549Q6P9A3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF549Q6P9A3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF549Q6P9A3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF549Q6P9A3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.43■□□□□ 0.7
ZNF549Q6P9A3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.43■□□□□ 0.7
ZNF549Q6P9A3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.43■□□□□ 0.7
ZNF549Q6P9A3 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.43■□□□□ 0.7
ZNF549Q6P9A3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.43■□□□□ 0.7
ZNF549Q6P9A3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF549Q6P9A3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF549Q6P9A3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF549Q6P9A3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF549Q6P9A3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.43■□□□□ 0.7
ZNF549Q6P9A3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF549Q6P9A3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF549Q6P9A3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.42■□□□□ 0.7
ZNF549Q6P9A3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF549Q6P9A3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.42■□□□□ 0.7
ZNF549Q6P9A3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF549Q6P9A3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF549Q6P9A3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF549Q6P9A3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF549Q6P9A3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF549Q6P9A3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF549Q6P9A3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ZNF549Q6P9A3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.42■□□□□ 0.7
ZNF549Q6P9A3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF549Q6P9A3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.42■□□□□ 0.7
ZNF549Q6P9A3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.42■□□□□ 0.7
ZNF549Q6P9A3 SOX15-203ENST00000570788 1093 ntBASIC19.42■□□□□ 0.7
ZNF549Q6P9A3 AC120498.8-201ENST00000614275 531 ntBASIC19.42■□□□□ 0.7
ZNF549Q6P9A3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.42■□□□□ 0.7
ZNF549Q6P9A3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF549Q6P9A3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF549Q6P9A3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF549Q6P9A3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF549Q6P9A3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF549Q6P9A3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF549Q6P9A3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF549Q6P9A3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF549Q6P9A3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF549Q6P9A3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF549Q6P9A3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF549Q6P9A3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.41■□□□□ 0.7
ZNF549Q6P9A3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ZNF549Q6P9A3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ZNF549Q6P9A3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF549Q6P9A3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF549Q6P9A3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF549Q6P9A3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF549Q6P9A3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF549Q6P9A3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.41■□□□□ 0.7
ZNF549Q6P9A3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.41■□□□□ 0.7
ZNF549Q6P9A3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.41■□□□□ 0.7
ZNF549Q6P9A3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ZNF549Q6P9A3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF549Q6P9A3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
ZNF549Q6P9A3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF549Q6P9A3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF549Q6P9A3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
ZNF549Q6P9A3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.41■□□□□ 0.7
ZNF549Q6P9A3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF549Q6P9A3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.41■□□□□ 0.7
ZNF549Q6P9A3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF549Q6P9A3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF549Q6P9A3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF549Q6P9A3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF549Q6P9A3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF549Q6P9A3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF549Q6P9A3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
ZNF549Q6P9A3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF549Q6P9A3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ZNF549Q6P9A3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF549Q6P9A3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.4■□□□□ 0.7
ZNF549Q6P9A3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF549Q6P9A3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF549Q6P9A3 ID1-201ENST00000376105 1233 ntBASIC19.4■□□□□ 0.7
ZNF549Q6P9A3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.4■□□□□ 0.7
ZNF549Q6P9A3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ZNF549Q6P9A3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.4■□□□□ 0.7
ZNF549Q6P9A3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
ZNF549Q6P9A3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF549Q6P9A3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF549Q6P9A3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF549Q6P9A3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ZNF549Q6P9A3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF549Q6P9A3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF549Q6P9A3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms