Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
YBX1P67809 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
YBX1P67809 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
YBX1P67809 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
YBX1P67809 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.11■□□□□ 0.65
YBX1P67809 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
YBX1P67809 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.11■□□□□ 0.65
YBX1P67809 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.11■□□□□ 0.65
YBX1P67809 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.11■□□□□ 0.65
YBX1P67809 AC069544.1-201ENST00000609399 999 ntBASIC19.11■□□□□ 0.65
YBX1P67809 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.11■□□□□ 0.65
YBX1P67809 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.11■□□□□ 0.65
YBX1P67809 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
YBX1P67809 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.1■□□□□ 0.65
YBX1P67809 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.1■□□□□ 0.65
YBX1P67809 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
YBX1P67809 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.1■□□□□ 0.65
YBX1P67809 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.1■□□□□ 0.65
YBX1P67809 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
YBX1P67809 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
YBX1P67809 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
YBX1P67809 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
YBX1P67809 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
YBX1P67809 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
YBX1P67809 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
YBX1P67809 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
YBX1P67809 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.1■□□□□ 0.65
YBX1P67809 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
YBX1P67809 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.09■□□□□ 0.65
YBX1P67809 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.09■□□□□ 0.65
YBX1P67809 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.09■□□□□ 0.65
YBX1P67809 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
YBX1P67809 BX323043.1-201ENST00000641006 1765 ntBASIC19.09■□□□□ 0.65
YBX1P67809 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.09■□□□□ 0.65
YBX1P67809 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
YBX1P67809 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.09■□□□□ 0.65
YBX1P67809 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
YBX1P67809 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.09■□□□□ 0.65
YBX1P67809 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
YBX1P67809 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
YBX1P67809 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
YBX1P67809 PRORSD1P-201ENST00000295112 541 ntBASIC19.09■□□□□ 0.65
YBX1P67809 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
YBX1P67809 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
YBX1P67809 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.09■□□□□ 0.65
YBX1P67809 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.09■□□□□ 0.65
YBX1P67809 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.09■□□□□ 0.65
YBX1P67809 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
YBX1P67809 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.09■□□□□ 0.65
YBX1P67809 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.09■□□□□ 0.65
YBX1P67809 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.09■□□□□ 0.65
YBX1P67809 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.09■□□□□ 0.65
YBX1P67809 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
YBX1P67809 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
YBX1P67809 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
YBX1P67809 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
YBX1P67809 AC018553.1-201ENST00000616682 1458 ntBASIC19.09■□□□□ 0.65
YBX1P67809 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
YBX1P67809 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
YBX1P67809 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
YBX1P67809 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
YBX1P67809 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
YBX1P67809 PHGDH-210ENST00000641115 1638 ntBASIC19.08■□□□□ 0.65
YBX1P67809 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.08■□□□□ 0.65
YBX1P67809 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.08■□□□□ 0.64
YBX1P67809 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.08■□□□□ 0.64
YBX1P67809 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.08■□□□□ 0.64
YBX1P67809 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
YBX1P67809 ITM2C-210ENST00000620962 501 ntBASIC19.08■□□□□ 0.64
YBX1P67809 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.08■□□□□ 0.64
YBX1P67809 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
YBX1P67809 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
YBX1P67809 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
YBX1P67809 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
YBX1P67809 TNXA-203ENST00000507684 2038 ntBASIC19.08■□□□□ 0.64
YBX1P67809 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
YBX1P67809 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.08■□□□□ 0.64
YBX1P67809 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
YBX1P67809 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
YBX1P67809 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
YBX1P67809 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
YBX1P67809 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
YBX1P67809 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
YBX1P67809 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.08■□□□□ 0.64
YBX1P67809 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
YBX1P67809 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
YBX1P67809 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.07■□□□□ 0.64
YBX1P67809 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
YBX1P67809 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
YBX1P67809 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
YBX1P67809 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.07■□□□□ 0.64
YBX1P67809 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
YBX1P67809 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
YBX1P67809 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
YBX1P67809 KRT17P3-201ENST00000420566 1262 ntBASIC19.07■□□□□ 0.64
YBX1P67809 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
YBX1P67809 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.07■□□□□ 0.64
YBX1P67809 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
YBX1P67809 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
YBX1P67809 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms