Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.69■□□□□ 0.42
RPS4XP62701 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.69■□□□□ 0.42
RPS4XP62701 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPS4XP62701 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPS4XP62701 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPS4XP62701 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPS4XP62701 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPS4XP62701 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.69■□□□□ 0.42
RPS4XP62701 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.68■□□□□ 0.42
RPS4XP62701 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.68■□□□□ 0.42
RPS4XP62701 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPS4XP62701 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.68■□□□□ 0.42
RPS4XP62701 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.68■□□□□ 0.42
RPS4XP62701 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.68■□□□□ 0.42
RPS4XP62701 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPS4XP62701 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPS4XP62701 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RPS4XP62701 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RPS4XP62701 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.68■□□□□ 0.42
RPS4XP62701 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RPS4XP62701 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RPS4XP62701 TFP1-202ENST00000475455 1573 ntBASIC17.68■□□□□ 0.42
RPS4XP62701 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.68■□□□□ 0.42
RPS4XP62701 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.68■□□□□ 0.42
RPS4XP62701 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.68■□□□□ 0.42
RPS4XP62701 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.68■□□□□ 0.42
RPS4XP62701 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
RPS4XP62701 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPS4XP62701 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.68■□□□□ 0.42
RPS4XP62701 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.68■□□□□ 0.42
RPS4XP62701 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RPS4XP62701 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RPS4XP62701 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPS4XP62701 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RPS4XP62701 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RPS4XP62701 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.67■□□□□ 0.42
RPS4XP62701 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4XP62701 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4XP62701 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4XP62701 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4XP62701 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.67■□□□□ 0.42
RPS4XP62701 AL390719.1-204ENST00000412397 1219 ntBASIC17.67■□□□□ 0.42
RPS4XP62701 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.67■□□□□ 0.42
RPS4XP62701 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.67■□□□□ 0.42
RPS4XP62701 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4XP62701 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4XP62701 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4XP62701 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RPS4XP62701 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4XP62701 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4XP62701 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4XP62701 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4XP62701 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4XP62701 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.67■□□□□ 0.42
RPS4XP62701 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4XP62701 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4XP62701 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4XP62701 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4XP62701 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPS4XP62701 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.67■□□□□ 0.42
RPS4XP62701 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.66■□□□□ 0.42
RPS4XP62701 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.66■□□□□ 0.42
RPS4XP62701 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPS4XP62701 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
RPS4XP62701 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPS4XP62701 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPS4XP62701 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.66■□□□□ 0.42
RPS4XP62701 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPS4XP62701 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.66■□□□□ 0.42
RPS4XP62701 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.66■□□□□ 0.42
RPS4XP62701 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.66■□□□□ 0.42
RPS4XP62701 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.66■□□□□ 0.42
RPS4XP62701 AC060766.5-201ENST00000590539 871 ntBASIC17.66■□□□□ 0.42
RPS4XP62701 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.66■□□□□ 0.42
RPS4XP62701 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPS4XP62701 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.66■□□□□ 0.42
RPS4XP62701 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.66■□□□□ 0.42
RPS4XP62701 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RPS4XP62701 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
RPS4XP62701 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPS4XP62701 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPS4XP62701 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPS4XP62701 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPS4XP62701 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RPS4XP62701 AL032819.2-201ENST00000624543 2162 ntBASIC17.66■□□□□ 0.42
RPS4XP62701 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPS4XP62701 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RPS4XP62701 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RPS4XP62701 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPS4XP62701 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.65■□□□□ 0.42
RPS4XP62701 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPS4XP62701 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.65■□□□□ 0.42
RPS4XP62701 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.65■□□□□ 0.42
RPS4XP62701 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RPS4XP62701 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RPS4XP62701 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RPS4XP62701 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPS4XP62701 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.65■□□□□ 0.42
RPS4XP62701 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.65■□□□□ 0.42
RPS4XP62701 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms