Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.19■□□□□ 0.82
PMS2P54278 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.19■□□□□ 0.82
PMS2P54278 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PMS2P54278 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PMS2P54278 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.19■□□□□ 0.82
PMS2P54278 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
PMS2P54278 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.19■□□□□ 0.82
PMS2P54278 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.19■□□□□ 0.82
PMS2P54278 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.19■□□□□ 0.82
PMS2P54278 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PMS2P54278 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PMS2P54278 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PMS2P54278 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PMS2P54278 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PMS2P54278 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PMS2P54278 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PMS2P54278 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.19■□□□□ 0.82
PMS2P54278 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
PMS2P54278 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PMS2P54278 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PMS2P54278 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.19■□□□□ 0.82
PMS2P54278 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PMS2P54278 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
PMS2P54278 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PMS2P54278 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PMS2P54278 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
PMS2P54278 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.18■□□□□ 0.82
PMS2P54278 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PMS2P54278 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMS2P54278 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.18■□□□□ 0.82
PMS2P54278 AC026471.1-201ENST00000564629 3026 ntBASIC20.18■□□□□ 0.82
PMS2P54278 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMS2P54278 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMS2P54278 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMS2P54278 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMS2P54278 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.18■□□□□ 0.82
PMS2P54278 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.18■□□□□ 0.82
PMS2P54278 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.18■□□□□ 0.82
PMS2P54278 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMS2P54278 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PMS2P54278 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PMS2P54278 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PMS2P54278 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PMS2P54278 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PMS2P54278 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
PMS2P54278 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.18■□□□□ 0.82
PMS2P54278 CROCCP3-202ENST00000420820 1947 ntBASIC20.17■□□□□ 0.82
PMS2P54278 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PMS2P54278 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.17■□□□□ 0.82
PMS2P54278 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PMS2P54278 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PMS2P54278 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.17■□□□□ 0.82
PMS2P54278 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PMS2P54278 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
PMS2P54278 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PMS2P54278 ABHD17AP1-201ENST00000358206 933 ntBASIC20.17■□□□□ 0.82
PMS2P54278 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.17■□□□□ 0.82
PMS2P54278 GPX1P1-201ENST00000388829 606 ntBASIC20.17■□□□□ 0.82
PMS2P54278 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
PMS2P54278 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PMS2P54278 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.17■□□□□ 0.82
PMS2P54278 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.17■□□□□ 0.82
PMS2P54278 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.17■□□□□ 0.82
PMS2P54278 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PMS2P54278 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PMS2P54278 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PMS2P54278 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PMS2P54278 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.17■□□□□ 0.82
PMS2P54278 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PMS2P54278 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.17■□□□□ 0.82
PMS2P54278 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
PMS2P54278 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
PMS2P54278 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PMS2P54278 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PMS2P54278 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PMS2P54278 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PMS2P54278 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PMS2P54278 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.16■□□□□ 0.82
PMS2P54278 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.16■□□□□ 0.82
PMS2P54278 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
PMS2P54278 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PMS2P54278 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
PMS2P54278 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PMS2P54278 CYP21A1P-202ENST00000354927 1481 ntBASIC20.16■□□□□ 0.82
PMS2P54278 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
PMS2P54278 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
PMS2P54278 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PMS2P54278 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
PMS2P54278 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PMS2P54278 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PMS2P54278 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PMS2P54278 MFSD11-216ENST00000590393 1141 ntBASIC20.15■□□□□ 0.82
PMS2P54278 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PMS2P54278 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.15■□□□□ 0.82
PMS2P54278 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.15■□□□□ 0.82
PMS2P54278 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PMS2P54278 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
PMS2P54278 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.15■□□□□ 0.82
PMS2P54278 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PMS2P54278 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms