Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
PMS1P54277 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PMS1P54277 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PMS1P54277 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PMS1P54277 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PMS1P54277 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.56■■□□□ 1.04
PMS1P54277 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PMS1P54277 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.56■■□□□ 1.04
PMS1P54277 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.56■■□□□ 1.04
PMS1P54277 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.56■■□□□ 1.04
PMS1P54277 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
PMS1P54277 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PMS1P54277 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PMS1P54277 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.56■■□□□ 1.04
PMS1P54277 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PMS1P54277 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PMS1P54277 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.55■■□□□ 1.04
PMS1P54277 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PMS1P54277 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.55■■□□□ 1.04
PMS1P54277 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
PMS1P54277 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PMS1P54277 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PMS1P54277 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.55■■□□□ 1.04
PMS1P54277 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PMS1P54277 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.55■■□□□ 1.04
PMS1P54277 PNMA6B-201ENST00000538162 1200 ntBASIC21.55■■□□□ 1.04
PMS1P54277 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.55■■□□□ 1.04
PMS1P54277 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.55■■□□□ 1.04
PMS1P54277 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PMS1P54277 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.55■■□□□ 1.04
PMS1P54277 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PMS1P54277 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.55■■□□□ 1.04
PMS1P54277 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PMS1P54277 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PMS1P54277 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.55■■□□□ 1.04
PMS1P54277 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.55■■□□□ 1.04
PMS1P54277 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.55■■□□□ 1.04
PMS1P54277 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
PMS1P54277 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
PMS1P54277 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PMS1P54277 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PMS1P54277 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PMS1P54277 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PMS1P54277 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
PMS1P54277 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PMS1P54277 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
PMS1P54277 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.54■■□□□ 1.04
PMS1P54277 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.54■■□□□ 1.04
PMS1P54277 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.54■■□□□ 1.04
PMS1P54277 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.54■■□□□ 1.04
PMS1P54277 AC142086.2-201ENST00000569753 217 ntBASIC21.54■■□□□ 1.04
PMS1P54277 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
PMS1P54277 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.54■■□□□ 1.04
PMS1P54277 TNXA-203ENST00000507684 2038 ntBASIC21.54■■□□□ 1.04
PMS1P54277 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PMS1P54277 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PMS1P54277 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
PMS1P54277 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PMS1P54277 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.53■■□□□ 1.04
PMS1P54277 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PMS1P54277 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.53■■□□□ 1.04
PMS1P54277 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PMS1P54277 AC069152.1-201ENST00000438030 544 ntBASIC21.53■■□□□ 1.04
PMS1P54277 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.53■■□□□ 1.04
PMS1P54277 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.53■■□□□ 1.04
PMS1P54277 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.53■■□□□ 1.04
PMS1P54277 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.53■■□□□ 1.04
PMS1P54277 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.53■■□□□ 1.04
PMS1P54277 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.53■■□□□ 1.04
PMS1P54277 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.53■■□□□ 1.04
PMS1P54277 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PMS1P54277 AC060766.5-201ENST00000590539 871 ntBASIC21.53■■□□□ 1.04
PMS1P54277 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PMS1P54277 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PMS1P54277 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
PMS1P54277 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PMS1P54277 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PMS1P54277 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PMS1P54277 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.53■■□□□ 1.04
PMS1P54277 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PMS1P54277 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PMS1P54277 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PMS1P54277 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PMS1P54277 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.53■■□□□ 1.04
PMS1P54277 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PMS1P54277 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.53■■□□□ 1.04
PMS1P54277 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PMS1P54277 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PMS1P54277 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PMS1P54277 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PMS1P54277 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PMS1P54277 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.52■■□□□ 1.04
PMS1P54277 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
PMS1P54277 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.52■■□□□ 1.04
PMS1P54277 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PMS1P54277 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.52■■□□□ 1.04
PMS1P54277 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.52■■□□□ 1.04
PMS1P54277 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PMS1P54277 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.52■■□□□ 1.04
PMS1P54277 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms