Protein–RNA interactions for Protein: P42574

CASP3, Caspase-3, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3P42574 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CASP3P42574 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CASP3P42574 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CASP3P42574 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CASP3P42574 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.3■□□□□ 0.52
CASP3P42574 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CASP3P42574 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CASP3P42574 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CASP3P42574 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CASP3P42574 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.3■□□□□ 0.52
CASP3P42574 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.3■□□□□ 0.52
CASP3P42574 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CASP3P42574 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CASP3P42574 AC073648.6-201ENST00000641589 218 ntBASIC18.3■□□□□ 0.52
CASP3P42574 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CASP3P42574 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CASP3P42574 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.3■□□□□ 0.52
CASP3P42574 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASP3P42574 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASP3P42574 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CASP3P42574 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASP3P42574 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CASP3P42574 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.29■□□□□ 0.52
CASP3P42574 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.29■□□□□ 0.52
CASP3P42574 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CASP3P42574 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASP3P42574 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.29■□□□□ 0.52
CASP3P42574 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.29■□□□□ 0.52
CASP3P42574 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CASP3P42574 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASP3P42574 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASP3P42574 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CASP3P42574 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CASP3P42574 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASP3P42574 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASP3P42574 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CASP3P42574 AC116562.4-201ENST00000641316 2276 ntBASIC18.29■□□□□ 0.52
CASP3P42574 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.29■□□□□ 0.52
CASP3P42574 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASP3P42574 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASP3P42574 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.28■□□□□ 0.52
CASP3P42574 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASP3P42574 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASP3P42574 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CASP3P42574 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CASP3P42574 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CASP3P42574 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.28■□□□□ 0.52
CASP3P42574 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASP3P42574 PRORSD1P-201ENST00000295112 541 ntBASIC18.28■□□□□ 0.52
CASP3P42574 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CASP3P42574 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASP3P42574 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CASP3P42574 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CASP3P42574 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.28■□□□□ 0.52
CASP3P42574 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.28■□□□□ 0.52
CASP3P42574 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CASP3P42574 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
CASP3P42574 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CASP3P42574 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CASP3P42574 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CASP3P42574 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CASP3P42574 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CASP3P42574 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CASP3P42574 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CASP3P42574 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CASP3P42574 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CASP3P42574 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.27■□□□□ 0.52
CASP3P42574 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CASP3P42574 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.27■□□□□ 0.52
CASP3P42574 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CASP3P42574 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.27■□□□□ 0.52
CASP3P42574 RPS2P52-201ENST00000469610 820 ntBASIC18.27■□□□□ 0.52
CASP3P42574 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CASP3P42574 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.27■□□□□ 0.52
CASP3P42574 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CASP3P42574 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.27■□□□□ 0.52
CASP3P42574 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CASP3P42574 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.27■□□□□ 0.52
CASP3P42574 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.27■□□□□ 0.52
CASP3P42574 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.27■□□□□ 0.52
CASP3P42574 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
CASP3P42574 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CASP3P42574 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CASP3P42574 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.27■□□□□ 0.51
CASP3P42574 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CASP3P42574 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASP3P42574 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASP3P42574 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
CASP3P42574 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CASP3P42574 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASP3P42574 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASP3P42574 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASP3P42574 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASP3P42574 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.26■□□□□ 0.51
CASP3P42574 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CASP3P42574 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CASP3P42574 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.26■□□□□ 0.51
CASP3P42574 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.26■□□□□ 0.51
CASP3P42574 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.26■□□□□ 0.51
CASP3P42574 AC069544.1-201ENST00000609399 999 ntBASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms