Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AC018553.1-201ENST00000616682 1458 ntBASIC20.56■□□□□ 0.88
RARAP10276 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RARAP10276 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.55■□□□□ 0.88
RARAP10276 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RARAP10276 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RARAP10276 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RARAP10276 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RARAP10276 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RARAP10276 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.55■□□□□ 0.88
RARAP10276 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RARAP10276 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RARAP10276 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RARAP10276 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.55■□□□□ 0.88
RARAP10276 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RARAP10276 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.55■□□□□ 0.88
RARAP10276 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.55■□□□□ 0.88
RARAP10276 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RARAP10276 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RARAP10276 HLA-B-256ENST00000639848 1089 ntBASIC20.55■□□□□ 0.88
RARAP10276 AC133041.1-202ENST00000642053 222 ntBASIC20.55■□□□□ 0.88
RARAP10276 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.55■□□□□ 0.88
RARAP10276 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RARAP10276 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RARAP10276 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.55■□□□□ 0.88
RARAP10276 AC116351.2-201ENST00000606540 1585 ntBASIC20.55■□□□□ 0.88
RARAP10276 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RARAP10276 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RARAP10276 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
RARAP10276 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RARAP10276 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RARAP10276 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RARAP10276 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
RARAP10276 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RARAP10276 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.54■□□□□ 0.88
RARAP10276 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RARAP10276 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RARAP10276 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RARAP10276 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RARAP10276 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RARAP10276 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.54■□□□□ 0.88
RARAP10276 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RARAP10276 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RARAP10276 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.54■□□□□ 0.88
RARAP10276 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RARAP10276 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RARAP10276 AC092368.3-202ENST00000574180 1591 ntBASIC20.54■□□□□ 0.88
RARAP10276 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.54■□□□□ 0.88
RARAP10276 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.54■□□□□ 0.88
RARAP10276 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RARAP10276 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
RARAP10276 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RARAP10276 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.54■□□□□ 0.88
RARAP10276 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RARAP10276 AL032819.2-201ENST00000624543 2162 ntBASIC20.53■□□□□ 0.88
RARAP10276 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RARAP10276 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RARAP10276 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RARAP10276 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RARAP10276 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RARAP10276 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RARAP10276 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RARAP10276 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RARAP10276 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.53■□□□□ 0.88
RARAP10276 HLA-L-209ENST00000420110 1011 ntBASIC20.53■□□□□ 0.88
RARAP10276 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.53■□□□□ 0.88
RARAP10276 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.53■□□□□ 0.88
RARAP10276 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RARAP10276 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.53■□□□□ 0.88
RARAP10276 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RARAP10276 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RARAP10276 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RARAP10276 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
RARAP10276 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RARAP10276 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RARAP10276 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RARAP10276 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RARAP10276 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RARAP10276 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RARAP10276 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RARAP10276 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RARAP10276 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.52■□□□□ 0.88
RARAP10276 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RARAP10276 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
RARAP10276 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RARAP10276 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RARAP10276 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RARAP10276 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.52■□□□□ 0.88
RARAP10276 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RARAP10276 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RARAP10276 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.52■□□□□ 0.88
RARAP10276 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.52■□□□□ 0.88
RARAP10276 AC060766.5-201ENST00000590539 871 ntBASIC20.52■□□□□ 0.88
RARAP10276 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RARAP10276 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RARAP10276 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RARAP10276 AC124283.5-201ENST00000624661 1809 ntBASIC20.52■□□□□ 0.88
RARAP10276 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RARAP10276 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RARAP10276 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
RARAP10276 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms