Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
GAPDHP04406 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GAPDHP04406 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.37■□□□□ 0.21
GAPDHP04406 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.37■□□□□ 0.21
GAPDHP04406 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GAPDHP04406 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GAPDHP04406 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GAPDHP04406 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
GAPDHP04406 TREX1-205ENST00000625293 1783 ntBASIC16.37■□□□□ 0.21
GAPDHP04406 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GAPDHP04406 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GAPDHP04406 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
GAPDHP04406 BX276092.2-201ENST00000417668 665 ntBASIC16.37■□□□□ 0.21
GAPDHP04406 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.37■□□□□ 0.21
GAPDHP04406 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
GAPDHP04406 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.37■□□□□ 0.21
GAPDHP04406 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.37■□□□□ 0.21
GAPDHP04406 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.37■□□□□ 0.21
GAPDHP04406 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
GAPDHP04406 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.37■□□□□ 0.21
GAPDHP04406 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GAPDHP04406 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.37■□□□□ 0.21
GAPDHP04406 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.37■□□□□ 0.21
GAPDHP04406 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GAPDHP04406 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
GAPDHP04406 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
GAPDHP04406 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GAPDHP04406 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.36■□□□□ 0.21
GAPDHP04406 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
GAPDHP04406 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
GAPDHP04406 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GAPDHP04406 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.36■□□□□ 0.21
GAPDHP04406 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.36■□□□□ 0.21
GAPDHP04406 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
GAPDHP04406 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
GAPDHP04406 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
GAPDHP04406 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
GAPDHP04406 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GAPDHP04406 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.36■□□□□ 0.21
GAPDHP04406 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GAPDHP04406 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.36■□□□□ 0.21
GAPDHP04406 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GAPDHP04406 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
GAPDHP04406 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.36■□□□□ 0.21
GAPDHP04406 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.36■□□□□ 0.21
GAPDHP04406 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
GAPDHP04406 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
GAPDHP04406 DPP3P2-201ENST00000416030 1696 ntBASIC16.36■□□□□ 0.21
GAPDHP04406 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.36■□□□□ 0.21
GAPDHP04406 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.36■□□□□ 0.21
GAPDHP04406 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.36■□□□□ 0.21
GAPDHP04406 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GAPDHP04406 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GAPDHP04406 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GAPDHP04406 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GAPDHP04406 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.35■□□□□ 0.21
GAPDHP04406 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GAPDHP04406 KRT17P1-201ENST00000399211 1546 ntBASIC16.35■□□□□ 0.21
GAPDHP04406 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
GAPDHP04406 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.35■□□□□ 0.21
GAPDHP04406 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GAPDHP04406 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GAPDHP04406 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GAPDHP04406 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.35■□□□□ 0.21
GAPDHP04406 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
GAPDHP04406 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.35■□□□□ 0.21
GAPDHP04406 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GAPDHP04406 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.35■□□□□ 0.21
GAPDHP04406 AC090192.1-201ENST00000517740 490 ntBASIC16.35■□□□□ 0.21
GAPDHP04406 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
GAPDHP04406 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
GAPDHP04406 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.35■□□□□ 0.21
GAPDHP04406 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GAPDHP04406 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GAPDHP04406 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.35■□□□□ 0.21
GAPDHP04406 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GAPDHP04406 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GAPDHP04406 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
GAPDHP04406 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GAPDHP04406 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.35■□□□□ 0.21
GAPDHP04406 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
GAPDHP04406 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GAPDHP04406 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GAPDHP04406 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
GAPDHP04406 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
GAPDHP04406 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GAPDHP04406 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GAPDHP04406 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GAPDHP04406 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.34■□□□□ 0.21
GAPDHP04406 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GAPDHP04406 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
GAPDHP04406 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.34■□□□□ 0.21
GAPDHP04406 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
GAPDHP04406 MIPEPP3-201ENST00000412105 444 ntBASIC16.34■□□□□ 0.21
GAPDHP04406 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.34■□□□□ 0.21
GAPDHP04406 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.34■□□□□ 0.21
GAPDHP04406 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.34■□□□□ 0.21
GAPDHP04406 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.34■□□□□ 0.21
GAPDHP04406 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.34■□□□□ 0.21
GAPDHP04406 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms