Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PFDN1O60925 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.57■□□□□ 0.4
PFDN1O60925 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PFDN1O60925 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PFDN1O60925 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PFDN1O60925 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.57■□□□□ 0.4
PFDN1O60925 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PFDN1O60925 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PFDN1O60925 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PFDN1O60925 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PFDN1O60925 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PFDN1O60925 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PFDN1O60925 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PFDN1O60925 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PFDN1O60925 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PFDN1O60925 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PFDN1O60925 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PFDN1O60925 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PFDN1O60925 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PFDN1O60925 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PFDN1O60925 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PFDN1O60925 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
PFDN1O60925 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PFDN1O60925 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PFDN1O60925 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PFDN1O60925 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PFDN1O60925 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PFDN1O60925 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
PFDN1O60925 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.56■□□□□ 0.4
PFDN1O60925 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PFDN1O60925 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PFDN1O60925 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PFDN1O60925 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PFDN1O60925 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.56■□□□□ 0.4
PFDN1O60925 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.56■□□□□ 0.4
PFDN1O60925 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PFDN1O60925 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PFDN1O60925 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
PFDN1O60925 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PFDN1O60925 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PFDN1O60925 DUX4L11-201ENST00000611504 1267 ntBASIC17.56■□□□□ 0.4
PFDN1O60925 DUX4L12-201ENST00000614593 1267 ntBASIC17.56■□□□□ 0.4
PFDN1O60925 DUX4L14-201ENST00000621227 1267 ntBASIC17.56■□□□□ 0.4
PFDN1O60925 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PFDN1O60925 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PFDN1O60925 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PFDN1O60925 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PFDN1O60925 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
PFDN1O60925 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
PFDN1O60925 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PFDN1O60925 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
PFDN1O60925 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PFDN1O60925 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PFDN1O60925 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.55■□□□□ 0.4
PFDN1O60925 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PFDN1O60925 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.55■□□□□ 0.4
PFDN1O60925 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.55■□□□□ 0.4
PFDN1O60925 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC17.55■□□□□ 0.4
PFDN1O60925 AL592295.1-201ENST00000400984 884 ntBASIC17.55■□□□□ 0.4
PFDN1O60925 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PFDN1O60925 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC17.55■□□□□ 0.4
PFDN1O60925 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PFDN1O60925 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PFDN1O60925 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
PFDN1O60925 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.55■□□□□ 0.4
PFDN1O60925 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PFDN1O60925 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PFDN1O60925 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PFDN1O60925 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PFDN1O60925 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PFDN1O60925 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PFDN1O60925 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PFDN1O60925 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.54■□□□□ 0.4
PFDN1O60925 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PFDN1O60925 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PFDN1O60925 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PFDN1O60925 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PFDN1O60925 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.54■□□□□ 0.4
PFDN1O60925 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PFDN1O60925 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PFDN1O60925 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PFDN1O60925 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PFDN1O60925 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
PFDN1O60925 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
PFDN1O60925 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PFDN1O60925 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PFDN1O60925 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PFDN1O60925 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PFDN1O60925 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PFDN1O60925 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PFDN1O60925 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PFDN1O60925 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PFDN1O60925 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.53■□□□□ 0.4
PFDN1O60925 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.53■□□□□ 0.4
PFDN1O60925 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PFDN1O60925 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PFDN1O60925 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PFDN1O60925 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PFDN1O60925 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PFDN1O60925 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms