Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC28A1O00337 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC28A1O00337 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC28A1O00337 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SLC28A1O00337 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SLC28A1O00337 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC28A1O00337 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC28A1O00337 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC28A1O00337 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC28A1O00337 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC28A1O00337 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.84■□□□□ 0.61
SLC28A1O00337 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SLC28A1O00337 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC28A1O00337 AC073210.2-201ENST00000430369 194 ntBASIC18.84■□□□□ 0.61
SLC28A1O00337 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC28A1O00337 AC005829.2-201ENST00000571422 1056 ntBASIC18.84■□□□□ 0.61
SLC28A1O00337 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC28A1O00337 AL137784.2-201ENST00000607332 1000 ntBASIC18.84■□□□□ 0.61
SLC28A1O00337 IKBKGP1-201ENST00000612193 1073 ntBASIC18.84■□□□□ 0.61
SLC28A1O00337 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
SLC28A1O00337 TFP1-202ENST00000475455 1573 ntBASIC18.84■□□□□ 0.61
SLC28A1O00337 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC28A1O00337 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC28A1O00337 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC28A1O00337 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC28A1O00337 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC28A1O00337 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SLC28A1O00337 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC28A1O00337 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC28A1O00337 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC28A1O00337 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC28A1O00337 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.83■□□□□ 0.61
SLC28A1O00337 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.83■□□□□ 0.61
SLC28A1O00337 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SLC28A1O00337 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SLC28A1O00337 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SLC28A1O00337 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC28A1O00337 MIR663A-201ENST00000385250 93 ntBASIC18.83■□□□□ 0.6
SLC28A1O00337 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.83■□□□□ 0.6
SLC28A1O00337 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.83■□□□□ 0.6
SLC28A1O00337 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.83■□□□□ 0.6
SLC28A1O00337 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SLC28A1O00337 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.83■□□□□ 0.6
SLC28A1O00337 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.83■□□□□ 0.6
SLC28A1O00337 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SLC28A1O00337 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.83■□□□□ 0.6
SLC28A1O00337 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.83■□□□□ 0.6
SLC28A1O00337 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SLC28A1O00337 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.83■□□□□ 0.6
SLC28A1O00337 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC28A1O00337 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SLC28A1O00337 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC28A1O00337 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC28A1O00337 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.83■□□□□ 0.6
SLC28A1O00337 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC28A1O00337 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC28A1O00337 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC28A1O00337 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SLC28A1O00337 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC28A1O00337 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC28A1O00337 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.82■□□□□ 0.6
SLC28A1O00337 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.82■□□□□ 0.6
SLC28A1O00337 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC28A1O00337 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC28A1O00337 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.82■□□□□ 0.6
SLC28A1O00337 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.82■□□□□ 0.6
SLC28A1O00337 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC28A1O00337 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SLC28A1O00337 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SLC28A1O00337 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SLC28A1O00337 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC28A1O00337 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC28A1O00337 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC28A1O00337 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC28A1O00337 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC28A1O00337 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SLC28A1O00337 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC28A1O00337 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC28A1O00337 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
SLC28A1O00337 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC28A1O00337 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.82■□□□□ 0.6
SLC28A1O00337 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC28A1O00337 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC28A1O00337 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
SLC28A1O00337 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC28A1O00337 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC28A1O00337 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC28A1O00337 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC28A1O00337 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC28A1O00337 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC28A1O00337 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC28A1O00337 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC28A1O00337 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC28A1O00337 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC28A1O00337 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC28A1O00337 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC28A1O00337 LINC01465-201ENST00000408887 1940 ntBASIC18.81■□□□□ 0.6
SLC28A1O00337 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SLC28A1O00337 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SLC28A1O00337 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms