Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 MFF-203ENST00000349901 1716 ntTSL 2 BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHKB-CPT1BH3BT56 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHKB-CPT1BH3BT56 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC10.9□□□□□ -0.66
CHKB-CPT1BH3BT56 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHKB-CPT1BH3BT56 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHKB-CPT1BH3BT56 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHKB-CPT1BH3BT56 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
CHKB-CPT1BH3BT56 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHKB-CPT1BH3BT56 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
CHKB-CPT1BH3BT56 AC009053.2-201ENST00000563701 2365 ntBASIC10.9□□□□□ -0.66
CHKB-CPT1BH3BT56 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHKB-CPT1BH3BT56 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHKB-CPT1BH3BT56 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CHKB-CPT1BH3BT56 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC10.9□□□□□ -0.66
CHKB-CPT1BH3BT56 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHKB-CPT1BH3BT56 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC10.9□□□□□ -0.66
CHKB-CPT1BH3BT56 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CHKB-CPT1BH3BT56 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
CHKB-CPT1BH3BT56 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC10.9□□□□□ -0.66
CHKB-CPT1BH3BT56 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC10.9□□□□□ -0.66
CHKB-CPT1BH3BT56 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHKB-CPT1BH3BT56 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHKB-CPT1BH3BT56 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC10.9□□□□□ -0.66
CHKB-CPT1BH3BT56 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHKB-CPT1BH3BT56 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHKB-CPT1BH3BT56 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHKB-CPT1BH3BT56 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHKB-CPT1BH3BT56 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
CHKB-CPT1BH3BT56 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHKB-CPT1BH3BT56 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC10.9□□□□□ -0.66
CHKB-CPT1BH3BT56 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CHKB-CPT1BH3BT56 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
CHKB-CPT1BH3BT56 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC10.9□□□□□ -0.67
CHKB-CPT1BH3BT56 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC10.9□□□□□ -0.67
CHKB-CPT1BH3BT56 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
CHKB-CPT1BH3BT56 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
CHKB-CPT1BH3BT56 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
CHKB-CPT1BH3BT56 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 AL390961.4-201ENST00000623958 2535 ntBASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 DUX4L29-201ENST00000425409 679 ntBASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CHKB-CPT1BH3BT56 PARN-205ENST00000539279 1557 ntTSL 2 BASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms