Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 MIR4497-201ENST00000583208 89 ntBASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 AL162377.1-201ENST00000618844 1793 ntBASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IGHV4-28A0A0C4DH34 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 AF186192.3-201ENST00000583427 947 ntBASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 AC113410.3-201ENST00000623366 203 ntBASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
IGHV4-28A0A0C4DH34 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
IGHV4-28A0A0C4DH34 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 AP001271.2-201ENST00000624018 1556 ntBASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 TSPY7P-201ENST00000431358 1114 ntBASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 GOLGA6L3-201ENST00000507199 1679 ntBASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
IGHV4-28A0A0C4DH34 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms