Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV5A0A0B4J249 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV5A0A0B4J249 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV5A0A0B4J249 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV5A0A0B4J249 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV5A0A0B4J249 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TRAV5A0A0B4J249 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV5A0A0B4J249 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV5A0A0B4J249 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV5A0A0B4J249 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV5A0A0B4J249 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TRAV5A0A0B4J249 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV5A0A0B4J249 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV5A0A0B4J249 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TRAV5A0A0B4J249 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV5A0A0B4J249 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
TRAV5A0A0B4J249 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV5A0A0B4J249 AC007613.1-201ENST00000572811 2597 ntBASIC15.21■□□□□ 0.03
TRAV5A0A0B4J249 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV5A0A0B4J249 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV5A0A0B4J249 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV5A0A0B4J249 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV5A0A0B4J249 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC15.21■□□□□ 0.03
TRAV5A0A0B4J249 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TRAV5A0A0B4J249 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV5A0A0B4J249 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV5A0A0B4J249 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV5A0A0B4J249 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV5A0A0B4J249 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TRAV5A0A0B4J249 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
TRAV5A0A0B4J249 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV5A0A0B4J249 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV5A0A0B4J249 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV5A0A0B4J249 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
TRAV5A0A0B4J249 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV5A0A0B4J249 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.21■□□□□ 0.02
TRAV5A0A0B4J249 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV5A0A0B4J249 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15.21■□□□□ 0.02
TRAV5A0A0B4J249 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV5A0A0B4J249 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV5A0A0B4J249 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV5A0A0B4J249 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV5A0A0B4J249 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRAV5A0A0B4J249 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV5A0A0B4J249 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.2■□□□□ 0.02
TRAV5A0A0B4J249 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV5A0A0B4J249 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV5A0A0B4J249 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRAV5A0A0B4J249 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV5A0A0B4J249 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV5A0A0B4J249 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV5A0A0B4J249 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV5A0A0B4J249 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
TRAV5A0A0B4J249 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRAV5A0A0B4J249 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC15.2■□□□□ 0.02
TRAV5A0A0B4J249 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRAV5A0A0B4J249 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV5A0A0B4J249 GAS2L1P2-201ENST00000436355 1356 ntBASIC15.2■□□□□ 0.02
TRAV5A0A0B4J249 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRAV5A0A0B4J249 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV5A0A0B4J249 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV5A0A0B4J249 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV5A0A0B4J249 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV5A0A0B4J249 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV5A0A0B4J249 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV5A0A0B4J249 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRAV5A0A0B4J249 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV5A0A0B4J249 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
TRAV5A0A0B4J249 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRAV5A0A0B4J249 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV5A0A0B4J249 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV5A0A0B4J249 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRAV5A0A0B4J249 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV5A0A0B4J249 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV5A0A0B4J249 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV5A0A0B4J249 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV5A0A0B4J249 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV5A0A0B4J249 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV5A0A0B4J249 PBX1-209ENST00000485769 834 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV5A0A0B4J249 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV5A0A0B4J249 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV5A0A0B4J249 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV5A0A0B4J249 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV5A0A0B4J249 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV5A0A0B4J249 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRAV5A0A0B4J249 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV5A0A0B4J249 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV5A0A0B4J249 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRAV5A0A0B4J249 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV5A0A0B4J249 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRAV5A0A0B4J249 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV5A0A0B4J249 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
TRAV5A0A0B4J249 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV5A0A0B4J249 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV5A0A0B4J249 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV5A0A0B4J249 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV5A0A0B4J249 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms