Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 KRT18P61-201ENST00000585825 1298 ntBASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 MIR5787-201ENST00000611784 55 ntBASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 NEFHP1-201ENST00000412845 2629 ntBASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 BID-204ENST00000399767 2129 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV8-4A0A0B4J246 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 BMP1-204ENST00000397814 836 ntTSL 4 BASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 KRT18P5-201ENST00000436075 1291 ntBASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 RARRES2P6-201ENST00000567333 442 ntBASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAV8-4A0A0B4J246 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV8-4A0A0B4J246 KRT8P36-201ENST00000489121 1440 ntBASIC13.71□□□□□ -0.22
TRAV8-4A0A0B4J246 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV8-4A0A0B4J246 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC13.71□□□□□ -0.22
TRAV8-4A0A0B4J246 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC13.71□□□□□ -0.22
TRAV8-4A0A0B4J246 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV8-4A0A0B4J246 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC13.71□□□□□ -0.22
TRAV8-4A0A0B4J246 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV8-4A0A0B4J246 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
TRAV8-4A0A0B4J246 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC13.71□□□□□ -0.22
TRAV8-4A0A0B4J246 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV8-4A0A0B4J246 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC13.71□□□□□ -0.22
TRAV8-4A0A0B4J246 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV8-4A0A0B4J246 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV8-4A0A0B4J246 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-4A0A0B4J246 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV8-4A0A0B4J246 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV8-4A0A0B4J246 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV8-4A0A0B4J246 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TRAV8-4A0A0B4J246 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-4A0A0B4J246 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-4A0A0B4J246 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC13.7□□□□□ -0.22
TRAV8-4A0A0B4J246 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV8-4A0A0B4J246 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV8-4A0A0B4J246 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV8-4A0A0B4J246 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TRAV8-4A0A0B4J246 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-4A0A0B4J246 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TRAV8-4A0A0B4J246 WWOX-218ENST00000627394 894 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV8-4A0A0B4J246 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-4A0A0B4J246 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TRAV8-4A0A0B4J246 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-4A0A0B4J246 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC13.7□□□□□ -0.22
TRAV8-4A0A0B4J246 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-4A0A0B4J246 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-4A0A0B4J246 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-4A0A0B4J246 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TRAV8-4A0A0B4J246 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV8-4A0A0B4J246 GAS2L1P2-201ENST00000436355 1356 ntBASIC13.7□□□□□ -0.22
TRAV8-4A0A0B4J246 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TRAV8-4A0A0B4J246 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV8-4A0A0B4J246 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRAV8-4A0A0B4J246 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms