Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.75■□□□□ 0.43
TRAV27A0A087WT01 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TRAV27A0A087WT01 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV27A0A087WT01 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV27A0A087WT01 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV27A0A087WT01 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV27A0A087WT01 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAV27A0A087WT01 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV27A0A087WT01 CROCCP5-201ENST00000436658 830 ntBASIC17.75■□□□□ 0.43
TRAV27A0A087WT01 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV27A0A087WT01 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAV27A0A087WT01 RAP2CP1-201ENST00000605103 478 ntBASIC17.75■□□□□ 0.43
TRAV27A0A087WT01 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRAV27A0A087WT01 TNXA-203ENST00000507684 2038 ntBASIC17.75■□□□□ 0.43
TRAV27A0A087WT01 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TRAV27A0A087WT01 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAV27A0A087WT01 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV27A0A087WT01 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV27A0A087WT01 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV27A0A087WT01 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TRAV27A0A087WT01 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV27A0A087WT01 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV27A0A087WT01 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.74■□□□□ 0.43
TRAV27A0A087WT01 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV27A0A087WT01 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV27A0A087WT01 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TRAV27A0A087WT01 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV27A0A087WT01 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.74■□□□□ 0.43
TRAV27A0A087WT01 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.74■□□□□ 0.43
TRAV27A0A087WT01 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.74■□□□□ 0.43
TRAV27A0A087WT01 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.74■□□□□ 0.43
TRAV27A0A087WT01 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRAV27A0A087WT01 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.74■□□□□ 0.43
TRAV27A0A087WT01 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV27A0A087WT01 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV27A0A087WT01 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV27A0A087WT01 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV27A0A087WT01 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV27A0A087WT01 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV27A0A087WT01 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV27A0A087WT01 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.74■□□□□ 0.43
TRAV27A0A087WT01 AC116351.2-201ENST00000606540 1585 ntBASIC17.74■□□□□ 0.43
TRAV27A0A087WT01 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
TRAV27A0A087WT01 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV27A0A087WT01 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV27A0A087WT01 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV27A0A087WT01 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV27A0A087WT01 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TRAV27A0A087WT01 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.73■□□□□ 0.43
TRAV27A0A087WT01 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.73■□□□□ 0.43
TRAV27A0A087WT01 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.73■□□□□ 0.43
TRAV27A0A087WT01 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRAV27A0A087WT01 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.73■□□□□ 0.43
TRAV27A0A087WT01 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.73■□□□□ 0.43
TRAV27A0A087WT01 AC004408.2-201ENST00000623613 2777 ntBASIC17.73■□□□□ 0.43
TRAV27A0A087WT01 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRAV27A0A087WT01 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.73■□□□□ 0.43
TRAV27A0A087WT01 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV27A0A087WT01 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.73■□□□□ 0.43
TRAV27A0A087WT01 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.73■□□□□ 0.43
TRAV27A0A087WT01 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV27A0A087WT01 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.73■□□□□ 0.43
TRAV27A0A087WT01 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV27A0A087WT01 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV27A0A087WT01 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TRAV27A0A087WT01 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV27A0A087WT01 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV27A0A087WT01 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV27A0A087WT01 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV27A0A087WT01 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TRAV27A0A087WT01 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV27A0A087WT01 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV27A0A087WT01 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV27A0A087WT01 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV27A0A087WT01 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV27A0A087WT01 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV27A0A087WT01 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV27A0A087WT01 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV27A0A087WT01 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV27A0A087WT01 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TRAV27A0A087WT01 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRAV27A0A087WT01 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.72■□□□□ 0.43
TRAV27A0A087WT01 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TRAV27A0A087WT01 MIR935-201ENST00000401179 91 ntBASIC17.72■□□□□ 0.43
TRAV27A0A087WT01 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV27A0A087WT01 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV27A0A087WT01 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV27A0A087WT01 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.72■□□□□ 0.43
TRAV27A0A087WT01 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV27A0A087WT01 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV27A0A087WT01 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV27A0A087WT01 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV27A0A087WT01 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TRAV27A0A087WT01 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV27A0A087WT01 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV27A0A087WT01 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.71■□□□□ 0.43
TRAV27A0A087WT01 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV27A0A087WT01 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TRAV27A0A087WT01 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV27A0A087WT01 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms