Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 AMOTL1-202ENST00000317829 8844 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 OTUD7B-202ENST00000581312 8872 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 RNA5SP247-201ENST00000411181 105 ntBASIC2.08□□□□□ -2.08
MACF1Q9UPN3 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 ABCF2P2-201ENST00000450549 296 ntBASIC2.08□□□□□ -2.08
MACF1Q9UPN3 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 AL133244.1-201ENST00000456007 258 ntBASIC2.08□□□□□ -2.08
MACF1Q9UPN3 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 AL713922.2-201ENST00000619384 716 ntBASIC2.08□□□□□ -2.08
MACF1Q9UPN3 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 RGMA-201ENST00000329082 11350 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 SV2C-202ENST00000502798 11035 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 LAMA3-203ENST00000399516 9834 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 AC007161.1-204ENST00000423039 460 ntBASIC2.08□□□□□ -2.08
MACF1Q9UPN3 SETP6-201ENST00000479329 568 ntBASIC2.08□□□□□ -2.08
MACF1Q9UPN3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 AC115286.1-201ENST00000604298 434 ntBASIC2.08□□□□□ -2.08
MACF1Q9UPN3 AC090506.2-201ENST00000624521 419 ntBASIC2.08□□□□□ -2.08
MACF1Q9UPN3 AP000843.1-201ENST00000624880 701 ntBASIC2.08□□□□□ -2.08
MACF1Q9UPN3 STX3-208ENST00000641815 3236 ntBASIC2.08□□□□□ -2.08
MACF1Q9UPN3 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 ZAN-205ENST00000613979 8669 ntAPPRIS P4 TSL 1 (best) BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 AP000350.7-201ENST00000624923 8030 ntBASIC2.08□□□□□ -2.08
MACF1Q9UPN3 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 ANKRD36P1-201ENST00000344424 659 ntBASIC2.08□□□□□ -2.08
MACF1Q9UPN3 Y_RNA.510-201ENST00000384511 114 ntBASIC2.08□□□□□ -2.08
MACF1Q9UPN3 RNU6ATAC-201ENST00000408749 126 ntBASIC2.08□□□□□ -2.08
MACF1Q9UPN3 UQCRBP1-201ENST00000421129 336 ntBASIC2.08□□□□□ -2.08
MACF1Q9UPN3 CYCSP11-201ENST00000436426 315 ntBASIC2.08□□□□□ -2.08
MACF1Q9UPN3 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 WBP1LP4-201ENST00000505043 344 ntBASIC2.08□□□□□ -2.08
MACF1Q9UPN3 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 OR6M2P-201ENST00000529831 871 ntBASIC2.08□□□□□ -2.08
MACF1Q9UPN3 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 AL133338.2-201ENST00000604292 736 ntBASIC2.08□□□□□ -2.08
MACF1Q9UPN3 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 FZD10-AS1-201ENST00000505807 10193 ntTSL 2 BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
MACF1Q9UPN3 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
MACF1Q9UPN3 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
MACF1Q9UPN3 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
MACF1Q9UPN3 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
MACF1Q9UPN3 RNU4ATAC2P-201ENST00000408674 126 ntBASIC2.07□□□□□ -2.08
MACF1Q9UPN3 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC2.07□□□□□ -2.08
MACF1Q9UPN3 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC2.07□□□□□ -2.08
MACF1Q9UPN3 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC2.07□□□□□ -2.08
MACF1Q9UPN3 AC024589.2-201ENST00000605642 1294 ntBASIC2.07□□□□□ -2.08
MACF1Q9UPN3 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.07□□□□□ -2.08
MACF1Q9UPN3 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC2.07□□□□□ -2.08
MACF1Q9UPN3 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
MACF1Q9UPN3 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC2.07□□□□□ -2.08
MACF1Q9UPN3 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
MACF1Q9UPN3 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
MACF1Q9UPN3 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
MACF1Q9UPN3 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
MACF1Q9UPN3 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
MACF1Q9UPN3 AL596266.1-201ENST00000448132 400 ntBASIC2.07□□□□□ -2.08
MACF1Q9UPN3 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC2.07□□□□□ -2.08
MACF1Q9UPN3 RN7SL352P-201ENST00000466002 277 ntBASIC2.07□□□□□ -2.08
MACF1Q9UPN3 AC055855.1-201ENST00000489563 579 ntBASIC2.07□□□□□ -2.08
MACF1Q9UPN3 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC2.07□□□□□ -2.08
MACF1Q9UPN3 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC2.07□□□□□ -2.08
MACF1Q9UPN3 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
MACF1Q9UPN3 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC2.07□□□□□ -2.08
MACF1Q9UPN3 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC2.07□□□□□ -2.08
MACF1Q9UPN3 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC2.07□□□□□ -2.08
MACF1Q9UPN3 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC2.07□□□□□ -2.08
MACF1Q9UPN3 EPB41-204ENST00000356093 5857 ntTSL 5 BASIC2.07□□□□□ -2.08
MACF1Q9UPN3 PEG10-208ENST00000615790 6394 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
MACF1Q9UPN3 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms