RNA–Protein interactions for RNA: ENST00000509559.1

LINC02496-201, Transcript of long intergenic non-protein coding RNA 2496, humanhuman

TSL 3 BASIC

Gene LINC02496, Length 584 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02496-201ENST00000509559 AEBP2Q6ZN18 517 aaPredicted RBP20.16■□□□□ 0.82
LINC02496-201ENST00000509559 CHIC1Q5VXU3 224 aa19.81■□□□□ 0.76
LINC02496-201ENST00000509559 PHF23Q9BUL5 403 aaPredicted RBP17.32■□□□□ 0.36
LINC02496-201ENST00000509559 SENP3Q9H4L4 574 aaPredicted RBP17.31■□□□□ 0.36
LINC02496-201ENST00000509559 PLPPR3Q6T4P5 718 aa16.19■□□□□ 0.18
LINC02496-201ENST00000509559 FOXD1Q16676 465 aa15.94■□□□□ 0.14
LINC02496-201ENST00000509559 ADRA2BP18089 450 aa15.34■□□□□ 0.05
LINC02496-201ENST00000509559 PPP6R1Q9UPN7 881 aa15.28■□□□□ 0.04
LINC02496-201ENST00000509559 PIAS4Q8N2W9 510 aaPredicted RBP15.15■□□□□ 0.02
LINC02496-201ENST00000509559 MSH5O43196 834 aa14.85□□□□□ -0.03
LINC02496-201ENST00000509559 SCAF1Q9H7N4 1312 aaKnown RBP14.25□□□□□ -0.13
LINC02496-201ENST00000509559 PPP4R3CPQ6ZMV5 832 aa14.22□□□□□ -0.13
LINC02496-201ENST00000509559 NCBP3Q53F19 620 aaKnown RBP13.99□□□□□ -0.17
LINC02496-201ENST00000509559 POTEDQ86YR6 584 aa13.92□□□□□ -0.18
LINC02496-201ENST00000509559 MAPK8IP2Q13387 824 aaPredicted RBP13.89□□□□□ -0.19
LINC02496-201ENST00000509559 CNKSR2Q8WXI2 1034 aa13.86□□□□□ -0.19
LINC02496-201ENST00000509559 KCNA4P22459 653 aa13.83□□□□□ -0.2
LINC02496-201ENST00000509559 DMRT2Q9Y5R5 561 aa13.75□□□□□ -0.21
LINC02496-201ENST00000509559 NPM3O75607 178 aaKnown RBP13.6□□□□□ -0.23
LINC02496-201ENST00000509559 RNF216Q9NWF9 866 aaPredicted RBP13.56□□□□□ -0.24
LINC02496-201ENST00000509559 HOXD11P31277 338 aaPredicted RBP13.45□□□□□ -0.26
LINC02496-201ENST00000509559 DCAF8L1A6NGE4 600 aa13.32□□□□□ -0.28
LINC02496-201ENST00000509559 SLC4A1APQ9BWU0 796 aaKnown RBP13.28□□□□□ -0.28
LINC02496-201ENST00000509559 DNAJC5BQ9UF47 199 aa13.15□□□□□ -0.3
LINC02496-201ENST00000509559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.97□□□□□ -0.33
LINC02496-201ENST00000509559 EHMT2Q96KQ7 1210 aa12.89□□□□□ -0.35
LINC02496-201ENST00000509559 FOXD4L1Q9NU39 408 aa12.81□□□□□ -0.36
LINC02496-201ENST00000509559 SLC4A2P04920 1241 aa12.77□□□□□ -0.37
LINC02496-201ENST00000509559 MYCNP04198 464 aaPredicted RBP12.66□□□□□ -0.38
LINC02496-201ENST00000509559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.65□□□□□ -0.38
LINC02496-201ENST00000509559 HNRNPUL2Q1KMD3 747 aaKnown RBP12.65□□□□□ -0.38
LINC02496-201ENST00000509559 CSRNP3Q8WYN3 585 aa12.63□□□□□ -0.39
LINC02496-201ENST00000509559 ZBTB22O15209 634 aa12.62□□□□□ -0.39
LINC02496-201ENST00000509559 RNF39Q9H2S5 420 aa12.61□□□□□ -0.39
LINC02496-201ENST00000509559 U3KPZ7 1027 aaPredicted RBP12.59□□□□□ -0.39
LINC02496-201ENST00000509559 APLP2Q06481 763 aa12.58□□□□□ -0.4
LINC02496-201ENST00000509559 C1QBPQ07021 282 aaKnown RBP12.56□□□□□ -0.4
LINC02496-201ENST00000509559 SAMD1Q6SPF0 538 aaPredicted RBP12.55□□□□□ -0.4
LINC02496-201ENST00000509559 CACNB1Q02641 598 aaPredicted RBP12.42□□□□□ -0.42
LINC02496-201ENST00000509559 ATXN8OSP0DMR3 200 aa12.38□□□□□ -0.43
LINC02496-201ENST00000509559 CAPN15O75808 1086 aa12.35□□□□□ -0.43
LINC02496-201ENST00000509559 ZNF219Q9P2Y4 722 aaPredicted RBP12.29□□□□□ -0.44
LINC02496-201ENST00000509559 TRHP20396 242 aaPredicted RBP12.27□□□□□ -0.45
LINC02496-201ENST00000509559 SPINK5Q9NQ38 1064 aaPredicted RBP12.25□□□□□ -0.45
LINC02496-201ENST00000509559 ATF5Q9Y2D1 282 aaPredicted RBP12.15□□□□□ -0.46
LINC02496-201ENST00000509559 ABCB7O75027 752 aa12.04□□□□□ -0.48
LINC02496-201ENST00000509559 POLA2Q14181 598 aa12.03□□□□□ -0.48
LINC02496-201ENST00000509559 DSG3P32926 999 aa12.01□□□□□ -0.49
LINC02496-201ENST00000509559 ZBTB12Q9Y330 459 aaPredicted RBP11.94□□□□□ -0.5
LINC02496-201ENST00000509559 FBLN2P98095 1184 aa11.9□□□□□ -0.5
LINC02496-201ENST00000509559 MKRN4PQ13434 485 aaPredicted RBP11.63□□□□□ -0.55
LINC02496-201ENST00000509559 RBM42Q9BTD8 480 aaKnown RBP11.61□□□□□ -0.55
LINC02496-201ENST00000509559 OSCARQ8IYS5 282 aa11.58□□□□□ -0.56
LINC02496-201ENST00000509559 SPDYE2BA6NHP3 402 aa11.55□□□□□ -0.56
LINC02496-201ENST00000509559 SPDYE6P0CI01 402 aa11.55□□□□□ -0.56
LINC02496-201ENST00000509559 SPDYE2Q495Y8 402 aa11.55□□□□□ -0.56
LINC02496-201ENST00000509559 FKBP8Q14318 412 aa11.54□□□□□ -0.56
LINC02496-201ENST00000509559 SPDYE4A6NLX3 237 aa11.53□□□□□ -0.56
LINC02496-201ENST00000509559 ZNF692Q9BU19 519 aaPredicted RBP11.53□□□□□ -0.56
LINC02496-201ENST00000509559 AKT1S1Q96B36 256 aa11.4□□□□□ -0.58
LINC02496-201ENST00000509559 SSUH2Q9Y2M2 353 aa11.35□□□□□ -0.59
LINC02496-201ENST00000509559 PABPN1Q86U42 306 aaKnown RBP eCLIP11.33□□□□□ -0.6
LINC02496-201ENST00000509559 STAG3Q9UJ98 1225 aa11.26□□□□□ -0.61
LINC02496-201ENST00000509559 SPDYE1Q8NFV5 336 aaPredicted RBP11.24□□□□□ -0.61
LINC02496-201ENST00000509559 FBXO3Q9UK99 471 aa11.24□□□□□ -0.61
LINC02496-201ENST00000509559 REM2Q8IYK8 340 aaPredicted RBP11.23□□□□□ -0.61
LINC02496-201ENST00000509559 CLEC11AQ9Y240 323 aa11.21□□□□□ -0.61
LINC02496-201ENST00000509559 PROM2Q8N271 834 aa11.18□□□□□ -0.62
LINC02496-201ENST00000509559 PRR29P0C7W0 189 aa11.11□□□□□ -0.63
LINC02496-201ENST00000509559 PLEKHG5O94827 1062 aa11.09□□□□□ -0.63
LINC02496-201ENST00000509559 PITPNM1O00562 1244 aa11.08□□□□□ -0.64
LINC02496-201ENST00000509559 CHRDL2Q6WN34 429 aa11.03□□□□□ -0.64
LINC02496-201ENST00000509559 PLCD3Q8N3E9 789 aa11.02□□□□□ -0.65
LINC02496-201ENST00000509559 MIER1Q8N108 512 aa11.01□□□□□ -0.65
LINC02496-201ENST00000509559 VASPP50552 380 aaPredicted RBP10.96□□□□□ -0.65
LINC02496-201ENST00000509559 ZBTB47Q9UFB7 747 aaPredicted RBP10.93□□□□□ -0.66
LINC02496-201ENST00000509559 KLHL34Q8N239 644 aa10.91□□□□□ -0.66
LINC02496-201ENST00000509559 PRKAR2AP13861 404 aaKnown RBP10.87□□□□□ -0.67
LINC02496-201ENST00000509559 FXR2P51116 673 aaKnown RBP eCLIP10.86□□□□□ -0.67
LINC02496-201ENST00000509559 NPM1P06748 294 aaKnown RBP eCLIP10.84□□□□□ -0.67
LINC02496-201ENST00000509559 PIP4P2Q8N4L2 257 aa10.84□□□□□ -0.67
LINC02496-201ENST00000509559 CHADLQ6NUI6 762 aa10.83□□□□□ -0.68
LINC02496-201ENST00000509559 CREBZFQ9NS37 354 aa10.82□□□□□ -0.68
LINC02496-201ENST00000509559 FARP1Q9Y4F1 1045 aaPredicted RBP10.75□□□□□ -0.69
LINC02496-201ENST00000509559 IFNLR1Q8IU57 520 aaPredicted RBP10.74□□□□□ -0.69
LINC02496-201ENST00000509559 SPOCK2Q92563 424 aa10.73□□□□□ -0.69
LINC02496-201ENST00000509559 POTEHQ6S545 545 aa10.71□□□□□ -0.69
LINC02496-201ENST00000509559 PAK3O75914 559 aaPredicted RBP10.69□□□□□ -0.7
LINC02496-201ENST00000509559 FAM212AQ96EL1 285 aa10.64□□□□□ -0.71
LINC02496-201ENST00000509559 MNX1P50219 401 aaPredicted RBP10.63□□□□□ -0.71
LINC02496-201ENST00000509559 DCAF8Q5TAQ9 597 aa10.63□□□□□ -0.71
LINC02496-201ENST00000509559 HAX1O00165 279 aa10.62□□□□□ -0.71
LINC02496-201ENST00000509559 CIZ1Q9ULV3 898 aaPredicted RBP10.62□□□□□ -0.71
LINC02496-201ENST00000509559 GSE1Q14687 1217 aa10.61□□□□□ -0.71
LINC02496-201ENST00000509559 AMER1Q5JTC6 1135 aaPredicted RBP10.58□□□□□ -0.72
LINC02496-201ENST00000509559 TSPYL2Q9H2G4 693 aaPredicted RBP10.58□□□□□ -0.72
LINC02496-201ENST00000509559 CD44P16070 742 aaKnown RBP10.57□□□□□ -0.72
LINC02496-201ENST00000509559 NUBP1P53384 320 aa10.57□□□□□ -0.72
LINC02496-201ENST00000509559 RASEFQ8IZ41 740 aa10.53□□□□□ -0.72
LINC02496-201ENST00000509559 ZRANB1Q9UGI0 708 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms