RNA–Protein interactions for RNA: ENST00000615947.1

LINC00598-206, long intergenic non-protein coding RNA 598, humanhuman

TSL 4 BASIC

Gene LINC00598, Length 3,541 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-206ENST00000615947 AEBP2Q6ZN18 517 aaPredicted RBP13.98□□□□□ -0.17
LINC00598-206ENST00000615947 CHIC1Q5VXU3 224 aa13.39□□□□□ -0.27
LINC00598-206ENST00000615947 NISCHQ9Y2I1 1504 aa12.21□□□□□ -0.45
LINC00598-206ENST00000615947 PHF23Q9BUL5 403 aaPredicted RBP12.07□□□□□ -0.48
LINC00598-206ENST00000615947 SENP3Q9H4L4 574 aaPredicted RBP11.46□□□□□ -0.58
LINC00598-206ENST00000615947 CCDC180Q9P1Z9 1646 aa11.23□□□□□ -0.61
LINC00598-206ENST00000615947 FOXD1Q16676 465 aa10.94□□□□□ -0.66
LINC00598-206ENST00000615947 PLPPR3Q6T4P5 718 aa10.94□□□□□ -0.66
LINC00598-206ENST00000615947 ADRA2BP18089 450 aa10.92□□□□□ -0.66
LINC00598-206ENST00000615947 PPP6R1Q9UPN7 881 aa10.86□□□□□ -0.67
LINC00598-206ENST00000615947 DCAF1Q9Y4B6 1507 aa10.78□□□□□ -0.68
LINC00598-206ENST00000615947 MYO15BQ96JP2 1530 aa10.65□□□□□ -0.7
LINC00598-206ENST00000615947 ZCCHC6Q5VYS8 1495 aaKnown RBP10.52□□□□□ -0.73
LINC00598-206ENST00000615947 PIAS4Q8N2W9 510 aaPredicted RBP10.5□□□□□ -0.73
LINC00598-206ENST00000615947 SHROOM4Q9ULL8 1493 aa10.2□□□□□ -0.78
LINC00598-206ENST00000615947 DCAF8L2P0C7V8 631 aa10.1□□□□□ -0.79
LINC00598-206ENST00000615947 SLC24A1O60721 1099 aa10.06□□□□□ -0.8
LINC00598-206ENST00000615947 KCNA4P22459 653 aa10.04□□□□□ -0.8
LINC00598-206ENST00000615947 ABCC9O60706 1549 aa10.01□□□□□ -0.81
LINC00598-206ENST00000615947 MAPK8IP2Q13387 824 aaPredicted RBP9.96□□□□□ -0.81
LINC00598-206ENST00000615947 EIF4G1Q04637 1599 aaKnown RBP9.95□□□□□ -0.82
LINC00598-206ENST00000615947 UNC13AQ9UPW8 1703 aa9.94□□□□□ -0.82
LINC00598-206ENST00000615947 NACADO15069 1562 aa9.93□□□□□ -0.82
LINC00598-206ENST00000615947 SUPT5HO00267 1087 aaKnown RBP9.93□□□□□ -0.82
LINC00598-206ENST00000615947 EHMT2Q96KQ7 1210 aa9.92□□□□□ -0.82
LINC00598-206ENST00000615947 MYT1Q01538 1121 aa9.84□□□□□ -0.83
LINC00598-206ENST00000615947 PPP4R3CPQ6ZMV5 832 aa9.83□□□□□ -0.84
LINC00598-206ENST00000615947 PEG3Q9GZU2 1588 aa9.83□□□□□ -0.84
LINC00598-206ENST00000615947 PELP1Q8IZL8 1130 aaKnown RBP9.83□□□□□ -0.84
LINC00598-206ENST00000615947 PRDM2Q13029 1718 aa9.64□□□□□ -0.87
LINC00598-206ENST00000615947 DCAF8L1A6NGE4 600 aa9.64□□□□□ -0.87
LINC00598-206ENST00000615947 BAZ1AQ9NRL2 1556 aaPredicted RBP9.63□□□□□ -0.87
LINC00598-206ENST00000615947 MSH5O43196 834 aa9.61□□□□□ -0.87
LINC00598-206ENST00000615947 RB1CC1Q8TDY2 1594 aa9.59□□□□□ -0.87
LINC00598-206ENST00000615947 PRKCSHP14314 528 aaPredicted RBP9.57□□□□□ -0.88
LINC00598-206ENST00000615947 BICRAQ9NZM4 1560 aa9.55□□□□□ -0.88
LINC00598-206ENST00000615947 TTBK1Q5TCY1 1321 aaPredicted RBP9.52□□□□□ -0.89
LINC00598-206ENST00000615947 NPM3O75607 178 aaKnown RBP9.51□□□□□ -0.89
LINC00598-206ENST00000615947 SMARCA2P51531 1590 aa9.47□□□□□ -0.89
LINC00598-206ENST00000615947 SCRIBQ14160 1630 aa9.45□□□□□ -0.9
LINC00598-206ENST00000615947 ERICH6Q7L0X2 663 aa9.44□□□□□ -0.9
LINC00598-206ENST00000615947 SMARCA4P51532 1647 aa9.44□□□□□ -0.9
LINC00598-206ENST00000615947 SLC4A1APQ9BWU0 796 aaKnown RBP9.42□□□□□ -0.9
LINC00598-206ENST00000615947 TOP2AP11388 1531 aaKnown RBP9.4□□□□□ -0.9
LINC00598-206ENST00000615947 SCAF1Q9H7N4 1312 aaKnown RBP9.37□□□□□ -0.91
LINC00598-206ENST00000615947 LOC105371045A0A1W2PR82 267 aa9.34□□□□□ -0.91
LINC00598-206ENST00000615947 NCBP3Q53F19 620 aaKnown RBP9.33□□□□□ -0.92
LINC00598-206ENST00000615947 BIVM-ERCC5R4GMW8 1640 aa9.32□□□□□ -0.92
LINC00598-206ENST00000615947 RSF1Q96T23 1441 aaPredicted RBP9.31□□□□□ -0.92
LINC00598-206ENST00000615947 CECR2Q9BXF3 1484 aa9.3□□□□□ -0.92
LINC00598-206ENST00000615947 HMGXB3Q12766 1538 aa9.3□□□□□ -0.92
LINC00598-206ENST00000615947 DAXXQ9UER7 740 aaPredicted RBP9.29□□□□□ -0.92
LINC00598-206ENST00000615947 CNKSR2Q8WXI2 1034 aa9.28□□□□□ -0.92
LINC00598-206ENST00000615947 PABPN1Q86U42 306 aaKnown RBP eCLIP9.25□□□□□ -0.93
LINC00598-206ENST00000615947 WIZO95785 1651 aa9.24□□□□□ -0.93
LINC00598-206ENST00000615947 APLP2Q06481 763 aa9.24□□□□□ -0.93
LINC00598-206ENST00000615947 MROH2BQ7Z745 1585 aa9.23□□□□□ -0.93
LINC00598-206ENST00000615947 FAM9AQ8IZU1 332 aaPredicted RBP9.22□□□□□ -0.93
LINC00598-206ENST00000615947 ZBTB22O15209 634 aa9.22□□□□□ -0.93
LINC00598-206ENST00000615947 CSRNP3Q8WYN3 585 aa9.18□□□□□ -0.94
LINC00598-206ENST00000615947 WDR97A6NE52 1622 aa9.16□□□□□ -0.94
LINC00598-206ENST00000615947 TRIM41Q8WV44 630 aa9.14□□□□□ -0.95
LINC00598-206ENST00000615947 KIF21BO75037 1637 aa9.13□□□□□ -0.95
LINC00598-206ENST00000615947 PCGF6Q9BYE7 350 aa9.13□□□□□ -0.95
LINC00598-206ENST00000615947 DMRT2Q9Y5R5 561 aa9.11□□□□□ -0.95
LINC00598-206ENST00000615947 TOP2BQ02880 1626 aa9.06□□□□□ -0.96
LINC00598-206ENST00000615947 HRCP23327 699 aa9.06□□□□□ -0.96
LINC00598-206ENST00000615947 EIF5BO60841 1220 aaKnown RBP9.01□□□□□ -0.97
LINC00598-206ENST00000615947 PPARGC1BQ86YN6 1023 aaKnown RBP9.01□□□□□ -0.97
LINC00598-206ENST00000615947 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9□□□□□ -0.97
LINC00598-206ENST00000615947 WRNQ14191 1432 aaPredicted RBP eCLIP8.99□□□□□ -0.97
LINC00598-206ENST00000615947 NCAPD3P42695 1498 aa8.99□□□□□ -0.97
LINC00598-206ENST00000615947 BCL11AQ9H165 835 aa8.99□□□□□ -0.97
LINC00598-206ENST00000615947 KIF21AQ7Z4S6 1674 aa8.98□□□□□ -0.97
LINC00598-206ENST00000615947 RNF216Q9NWF9 866 aaPredicted RBP8.98□□□□□ -0.97
LINC00598-206ENST00000615947 ERICH3Q5RHP9 1530 aa8.97□□□□□ -0.97
LINC00598-206ENST00000615947 SLC4A2P04920 1241 aa8.96□□□□□ -0.98
LINC00598-206ENST00000615947 POTEDQ86YR6 584 aa8.94□□□□□ -0.98
LINC00598-206ENST00000615947 CCDC88BA6NC98 1476 aa8.94□□□□□ -0.98
LINC00598-206ENST00000615947 EEA1Q15075 1411 aa8.94□□□□□ -0.98
LINC00598-206ENST00000615947 ABCC8Q09428 1581 aa8.93□□□□□ -0.98
LINC00598-206ENST00000615947 ATAD2BQ9ULI0 1458 aa8.92□□□□□ -0.98
LINC00598-206ENST00000615947 BAZ1BQ9UIG0 1483 aaKnown RBP8.91□□□□□ -0.98
LINC00598-206ENST00000615947 SYNJ1O43426 1573 aa8.89□□□□□ -0.99
LINC00598-206ENST00000615947 MAP3K1Q13233 1512 aa8.87□□□□□ -0.99
LINC00598-206ENST00000615947 HOXD11P31277 338 aaPredicted RBP8.87□□□□□ -0.99
LINC00598-206ENST00000615947 RTN4Q9NQC3 1192 aaKnown RBP8.85□□□□□ -0.99
LINC00598-206ENST00000615947 SOGA1O94964 1423 aa8.85□□□□□ -0.99
LINC00598-206ENST00000615947 RUSC2Q8N2Y8 1516 aa8.84□□□□□ -0.99
LINC00598-206ENST00000615947 CC2D2AQ9P2K1 1620 aa8.84□□□□□ -0.99
LINC00598-206ENST00000615947 CFAP43Q8NDM7 1665 aa8.84□□□□□ -1
LINC00598-206ENST00000615947 FOXD4L1Q9NU39 408 aa8.83□□□□□ -1
LINC00598-206ENST00000615947 PLEKHG5O94827 1062 aa8.83□□□□□ -1
LINC00598-206ENST00000615947 TRIM26Q12899 539 aaPredicted RBP8.82□□□□□ -1
LINC00598-206ENST00000615947 CFTRP13569 1480 aa8.81□□□□□ -1
LINC00598-206ENST00000615947 TRHP20396 242 aaPredicted RBP8.81□□□□□ -1
LINC00598-206ENST00000615947 RANGAP1P46060 587 aaPredicted RBP8.81□□□□□ -1
LINC00598-206ENST00000615947 ABCA5Q8WWZ7 1642 aa8.8□□□□□ -1
LINC00598-206ENST00000615947 ATF5Q9Y2D1 282 aaPredicted RBP8.8□□□□□ -1
LINC00598-206ENST00000615947 CTTNBP2Q8WZ74 1663 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms