RNA–Protein interactions for RNA: ENST00000408674.1

RNU4ATAC2P-201, Transcript of RNA, U4atac small nuclear 2, pseudogene, humanhuman

BASIC

Gene RNU4ATAC2P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC2P-201ENST00000408674 AEBP2Q6ZN18 517 aaPredicted RBP15.06■□□□□ 0
RNU4ATAC2P-201ENST00000408674 NISCHQ9Y2I1 1504 aa14.71□□□□□ -0.05
RNU4ATAC2P-201ENST00000408674 CHIC1Q5VXU3 224 aa14.22□□□□□ -0.13
RNU4ATAC2P-201ENST00000408674 SENP3Q9H4L4 574 aaPredicted RBP13.06□□□□□ -0.32
RNU4ATAC2P-201ENST00000408674 CCDC180Q9P1Z9 1646 aa12.77□□□□□ -0.36
RNU4ATAC2P-201ENST00000408674 PHF23Q9BUL5 403 aaPredicted RBP12.75□□□□□ -0.37
RNU4ATAC2P-201ENST00000408674 ZCCHC6Q5VYS8 1495 aaKnown RBP12.38□□□□□ -0.43
RNU4ATAC2P-201ENST00000408674 DCAF1Q9Y4B6 1507 aa12.24□□□□□ -0.45
RNU4ATAC2P-201ENST00000408674 DCAF8L2P0C7V8 631 aa12.2□□□□□ -0.46
RNU4ATAC2P-201ENST00000408674 SHROOM4Q9ULL8 1493 aa12.13□□□□□ -0.47
RNU4ATAC2P-201ENST00000408674 FOXD1Q16676 465 aa12.12□□□□□ -0.47
RNU4ATAC2P-201ENST00000408674 MYO15BQ96JP2 1530 aa12.02□□□□□ -0.48
RNU4ATAC2P-201ENST00000408674 SUPT5HO00267 1087 aaKnown RBP11.94□□□□□ -0.5
RNU4ATAC2P-201ENST00000408674 POTEDQ86YR6 584 aa11.94□□□□□ -0.5
RNU4ATAC2P-201ENST00000408674 NACADO15069 1562 aa11.87□□□□□ -0.51
RNU4ATAC2P-201ENST00000408674 RB1CC1Q8TDY2 1594 aa11.71□□□□□ -0.54
RNU4ATAC2P-201ENST00000408674 ABCC9O60706 1549 aa11.7□□□□□ -0.54
RNU4ATAC2P-201ENST00000408674 SCRIBQ14160 1630 aa11.67□□□□□ -0.54
RNU4ATAC2P-201ENST00000408674 MSH5O43196 834 aa11.64□□□□□ -0.55
RNU4ATAC2P-201ENST00000408674 RSF1Q96T23 1441 aaPredicted RBP11.49□□□□□ -0.57
RNU4ATAC2P-201ENST00000408674 BAZ1AQ9NRL2 1556 aaPredicted RBP11.42□□□□□ -0.58
RNU4ATAC2P-201ENST00000408674 TRIM41Q8WV44 630 aa11.33□□□□□ -0.6
RNU4ATAC2P-201ENST00000408674 MROH2BQ7Z745 1585 aa11.28□□□□□ -0.6
RNU4ATAC2P-201ENST00000408674 CECR2Q9BXF3 1484 aa11.27□□□□□ -0.6
RNU4ATAC2P-201ENST00000408674 UNC13AQ9UPW8 1703 aa11.27□□□□□ -0.61
RNU4ATAC2P-201ENST00000408674 SMARCA4P51532 1647 aa11.24□□□□□ -0.61
RNU4ATAC2P-201ENST00000408674 WIZO95785 1651 aa11.23□□□□□ -0.61
RNU4ATAC2P-201ENST00000408674 PIAS4Q8N2W9 510 aaPredicted RBP11.22□□□□□ -0.61
RNU4ATAC2P-201ENST00000408674 TOP2AP11388 1531 aaKnown RBP11.2□□□□□ -0.62
RNU4ATAC2P-201ENST00000408674 SMARCA2P51531 1590 aa11.11□□□□□ -0.63
RNU4ATAC2P-201ENST00000408674 PEG3Q9GZU2 1588 aa11.11□□□□□ -0.63
RNU4ATAC2P-201ENST00000408674 BICRAQ9NZM4 1560 aa11.11□□□□□ -0.63
RNU4ATAC2P-201ENST00000408674 PABPN1Q86U42 306 aaKnown RBP eCLIP11.1□□□□□ -0.63
RNU4ATAC2P-201ENST00000408674 CCDC88BA6NC98 1476 aa11.06□□□□□ -0.64
RNU4ATAC2P-201ENST00000408674 EEA1Q15075 1411 aa11.04□□□□□ -0.64
RNU4ATAC2P-201ENST00000408674 LOC105371045A0A1W2PR82 267 aa11.04□□□□□ -0.64
RNU4ATAC2P-201ENST00000408674 PLPPR3Q6T4P5 718 aa11.03□□□□□ -0.64
RNU4ATAC2P-201ENST00000408674 BAZ1BQ9UIG0 1483 aaKnown RBP11.02□□□□□ -0.65
RNU4ATAC2P-201ENST00000408674 TRIM26Q12899 539 aaPredicted RBP11.02□□□□□ -0.65
RNU4ATAC2P-201ENST00000408674 ATAD2BQ9ULI0 1458 aa10.99□□□□□ -0.65
RNU4ATAC2P-201ENST00000408674 FAM9AQ8IZU1 332 aaPredicted RBP10.98□□□□□ -0.65
RNU4ATAC2P-201ENST00000408674 PCGF6Q9BYE7 350 aa10.97□□□□□ -0.65
RNU4ATAC2P-201ENST00000408674 PPP6R1Q9UPN7 881 aa10.95□□□□□ -0.66
RNU4ATAC2P-201ENST00000408674 EIF4G1Q04637 1599 aaKnown RBP10.94□□□□□ -0.66
RNU4ATAC2P-201ENST00000408674 ZEB1P37275 1124 aaPredicted RBP10.93□□□□□ -0.66
RNU4ATAC2P-201ENST00000408674 HMGXB3Q12766 1538 aa10.91□□□□□ -0.66
RNU4ATAC2P-201ENST00000408674 HRCP23327 699 aa10.9□□□□□ -0.66
RNU4ATAC2P-201ENST00000408674 WRNQ14191 1432 aaPredicted RBP eCLIP10.9□□□□□ -0.66
RNU4ATAC2P-201ENST00000408674 NCAPD3P42695 1498 aa10.89□□□□□ -0.67
RNU4ATAC2P-201ENST00000408674 ADRA2BP18089 450 aa10.88□□□□□ -0.67
RNU4ATAC2P-201ENST00000408674 CSRNP3Q8WYN3 585 aa10.88□□□□□ -0.67
RNU4ATAC2P-201ENST00000408674 ABCC8Q09428 1581 aa10.84□□□□□ -0.67
RNU4ATAC2P-201ENST00000408674 UBTFP17480 764 aaKnown RBP10.82□□□□□ -0.68
RNU4ATAC2P-201ENST00000408674 TNIKQ9UKE5 1360 aa10.81□□□□□ -0.68
RNU4ATAC2P-201ENST00000408674 GOLGA3Q08378 1498 aa10.8□□□□□ -0.68
RNU4ATAC2P-201ENST00000408674 CEP164Q9UPV0 1460 aa10.79□□□□□ -0.68
RNU4ATAC2P-201ENST00000408674 APLP2Q06481 763 aa10.76□□□□□ -0.69
RNU4ATAC2P-201ENST00000408674 EHMT2Q96KQ7 1210 aa10.75□□□□□ -0.69
RNU4ATAC2P-201ENST00000408674 TOP2BQ02880 1626 aa10.73□□□□□ -0.69
RNU4ATAC2P-201ENST00000408674 SOGA1O94964 1423 aa10.73□□□□□ -0.69
RNU4ATAC2P-201ENST00000408674 KIF21BO75037 1637 aa10.73□□□□□ -0.69
RNU4ATAC2P-201ENST00000408674 PRDM2Q13029 1718 aa10.72□□□□□ -0.69
RNU4ATAC2P-201ENST00000408674 CFTRP13569 1480 aa10.71□□□□□ -0.69
RNU4ATAC2P-201ENST00000408674 CEP162Q5TB80 1403 aa10.71□□□□□ -0.69
RNU4ATAC2P-201ENST00000408674 BIVM-ERCC5R4GMW8 1640 aa10.7□□□□□ -0.7
RNU4ATAC2P-201ENST00000408674 SYNJ1O43426 1573 aa10.69□□□□□ -0.7
RNU4ATAC2P-201ENST00000408674 KIF27Q86VH2 1401 aa10.67□□□□□ -0.7
RNU4ATAC2P-201ENST00000408674 CADPSQ9ULU8 1353 aa10.66□□□□□ -0.7
RNU4ATAC2P-201ENST00000408674 ERICH3Q5RHP9 1530 aa10.63□□□□□ -0.71
RNU4ATAC2P-201ENST00000408674 CC2D2AQ9P2K1 1620 aa10.62□□□□□ -0.71
RNU4ATAC2P-201ENST00000408674 CLIP1P30622 1438 aa10.61□□□□□ -0.71
RNU4ATAC2P-201ENST00000408674 RUSC2Q8N2Y8 1516 aa10.58□□□□□ -0.72
RNU4ATAC2P-201ENST00000408674 CUX1P39880 1505 aa10.55□□□□□ -0.72
RNU4ATAC2P-201ENST00000408674 CCER1Q8TC90 406 aaPredicted RBP10.55□□□□□ -0.72
RNU4ATAC2P-201ENST00000408674 VPS8Q8N3P4 1428 aa10.55□□□□□ -0.72
RNU4ATAC2P-201ENST00000408674 LAMC3Q9Y6N6 1575 aa10.53□□□□□ -0.72
RNU4ATAC2P-201ENST00000408674 PRXQ9BXM0 1461 aa10.53□□□□□ -0.72
RNU4ATAC2P-201ENST00000408674 PDS5BQ9NTI5 1447 aa10.51□□□□□ -0.73
RNU4ATAC2P-201ENST00000408674 FANCD2Q9BXW9 1451 aa10.51□□□□□ -0.73
RNU4ATAC2P-201ENST00000408674 RAPGEF2Q9Y4G8 1499 aa10.51□□□□□ -0.73
RNU4ATAC2P-201ENST00000408674 PPARGC1BQ86YN6 1023 aaKnown RBP10.48□□□□□ -0.73
RNU4ATAC2P-201ENST00000408674 CUX2O14529 1486 aa10.48□□□□□ -0.73
RNU4ATAC2P-201ENST00000408674 DNMBPQ6XZF7 1577 aa10.48□□□□□ -0.73
RNU4ATAC2P-201ENST00000408674 CARMIL1Q5VZK9 1371 aa10.46□□□□□ -0.74
RNU4ATAC2P-201ENST00000408674 FGD5Q6ZNL6 1462 aa10.45□□□□□ -0.74
RNU4ATAC2P-201ENST00000408674 FHAD1B1AJZ9 1412 aa10.43□□□□□ -0.74
RNU4ATAC2P-201ENST00000408674 IGF1RP08069 1367 aa10.42□□□□□ -0.74
RNU4ATAC2P-201ENST00000408674 CUL7Q14999 1698 aa10.42□□□□□ -0.74
RNU4ATAC2P-201ENST00000408674 RANGAP1P46060 587 aaPredicted RBP10.42□□□□□ -0.74
RNU4ATAC2P-201ENST00000408674 ABCA10Q8WWZ4 1543 aa10.41□□□□□ -0.74
RNU4ATAC2P-201ENST00000408674 TOPBP1Q92547 1522 aa10.39□□□□□ -0.75
RNU4ATAC2P-201ENST00000408674 MAP3K1Q13233 1512 aa10.38□□□□□ -0.75
RNU4ATAC2P-201ENST00000408674 TTBK1Q5TCY1 1321 aaPredicted RBP10.38□□□□□ -0.75
RNU4ATAC2P-201ENST00000408674 CLSPNQ9HAW4 1339 aa10.38□□□□□ -0.75
RNU4ATAC2P-201ENST00000408674 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.37□□□□□ -0.75
RNU4ATAC2P-201ENST00000408674 EFCAB5A4FU69 1503 aa10.36□□□□□ -0.75
RNU4ATAC2P-201ENST00000408674 POLA1P09884 1462 aaPredicted RBP10.34□□□□□ -0.75
RNU4ATAC2P-201ENST00000408674 ARAP1Q96P48 1450 aa10.33□□□□□ -0.76
RNU4ATAC2P-201ENST00000408674 HNRNPUL2Q1KMD3 747 aaKnown RBP10.32□□□□□ -0.76
RNU4ATAC2P-201ENST00000408674 FMN1Q68DA7 1419 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms