RNA–Protein interactions for RNA: ENST00000408674.1

RNU4ATAC2P-201, Transcript of RNA, U4atac small nuclear 2, pseudogene, humanhuman

BASIC

Gene RNU4ATAC2P, Length 126 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC2P-201ENST00000408674 AEBP2Q6ZN18 517 aaPredicted RBP15.06■□□□□ 0
RNU4ATAC2P-201ENST00000408674 NISCHQ9Y2I1 1504 aa14.71□□□□□ -0.05
RNU4ATAC2P-201ENST00000408674 CHIC1Q5VXU3 224 aa14.22□□□□□ -0.13
RNU4ATAC2P-201ENST00000408674 SENP3Q9H4L4 574 aaPredicted RBP13.06□□□□□ -0.32
RNU4ATAC2P-201ENST00000408674 CCDC180Q9P1Z9 1646 aa12.77□□□□□ -0.36
RNU4ATAC2P-201ENST00000408674 PHF23Q9BUL5 403 aaPredicted RBP12.75□□□□□ -0.37
RNU4ATAC2P-201ENST00000408674 ZCCHC6Q5VYS8 1495 aaKnown RBP12.38□□□□□ -0.43
RNU4ATAC2P-201ENST00000408674 DCAF1Q9Y4B6 1507 aa12.24□□□□□ -0.45
RNU4ATAC2P-201ENST00000408674 DCAF8L2P0C7V8 631 aa12.2□□□□□ -0.46
RNU4ATAC2P-201ENST00000408674 SHROOM4Q9ULL8 1493 aa12.13□□□□□ -0.47
RNU4ATAC2P-201ENST00000408674 FOXD1Q16676 465 aa12.12□□□□□ -0.47
RNU4ATAC2P-201ENST00000408674 MYO15BQ96JP2 1530 aa12.02□□□□□ -0.48
RNU4ATAC2P-201ENST00000408674 SUPT5HO00267 1087 aaKnown RBP11.94□□□□□ -0.5
RNU4ATAC2P-201ENST00000408674 POTEDQ86YR6 584 aa11.94□□□□□ -0.5
RNU4ATAC2P-201ENST00000408674 NACADO15069 1562 aa11.87□□□□□ -0.51
RNU4ATAC2P-201ENST00000408674 RB1CC1Q8TDY2 1594 aa11.71□□□□□ -0.54
RNU4ATAC2P-201ENST00000408674 ABCC9O60706 1549 aa11.7□□□□□ -0.54
RNU4ATAC2P-201ENST00000408674 SCRIBQ14160 1630 aa11.67□□□□□ -0.54
RNU4ATAC2P-201ENST00000408674 MSH5O43196 834 aa11.64□□□□□ -0.55
RNU4ATAC2P-201ENST00000408674 RSF1Q96T23 1441 aaPredicted RBP11.49□□□□□ -0.57
RNU4ATAC2P-201ENST00000408674 BAZ1AQ9NRL2 1556 aaPredicted RBP11.42□□□□□ -0.58
RNU4ATAC2P-201ENST00000408674 TRIM41Q8WV44 630 aa11.33□□□□□ -0.6
RNU4ATAC2P-201ENST00000408674 MROH2BQ7Z745 1585 aa11.28□□□□□ -0.6
RNU4ATAC2P-201ENST00000408674 CECR2Q9BXF3 1484 aa11.27□□□□□ -0.6
RNU4ATAC2P-201ENST00000408674 UNC13AQ9UPW8 1703 aa11.27□□□□□ -0.61
RNU4ATAC2P-201ENST00000408674 SMARCA4P51532 1647 aa11.24□□□□□ -0.61
RNU4ATAC2P-201ENST00000408674 WIZO95785 1651 aa11.23□□□□□ -0.61
RNU4ATAC2P-201ENST00000408674 PIAS4Q8N2W9 510 aaPredicted RBP11.22□□□□□ -0.61
RNU4ATAC2P-201ENST00000408674 TOP2AP11388 1531 aaKnown RBP11.2□□□□□ -0.62
RNU4ATAC2P-201ENST00000408674 SMARCA2P51531 1590 aa11.11□□□□□ -0.63
RNU4ATAC2P-201ENST00000408674 PEG3Q9GZU2 1588 aa11.11□□□□□ -0.63
RNU4ATAC2P-201ENST00000408674 BICRAQ9NZM4 1560 aa11.11□□□□□ -0.63
RNU4ATAC2P-201ENST00000408674 PABPN1Q86U42 306 aaKnown RBP eCLIP11.1□□□□□ -0.63
RNU4ATAC2P-201ENST00000408674 CCDC88BA6NC98 1476 aa11.06□□□□□ -0.64
RNU4ATAC2P-201ENST00000408674 EEA1Q15075 1411 aa11.04□□□□□ -0.64
RNU4ATAC2P-201ENST00000408674 LOC105371045A0A1W2PR82 267 aa11.04□□□□□ -0.64
RNU4ATAC2P-201ENST00000408674 PLPPR3Q6T4P5 718 aa11.03□□□□□ -0.64
RNU4ATAC2P-201ENST00000408674 BAZ1BQ9UIG0 1483 aaKnown RBP11.02□□□□□ -0.65
RNU4ATAC2P-201ENST00000408674 TRIM26Q12899 539 aaPredicted RBP11.02□□□□□ -0.65
RNU4ATAC2P-201ENST00000408674 ATAD2BQ9ULI0 1458 aa10.99□□□□□ -0.65
RNU4ATAC2P-201ENST00000408674 FAM9AQ8IZU1 332 aaPredicted RBP10.98□□□□□ -0.65
RNU4ATAC2P-201ENST00000408674 PCGF6Q9BYE7 350 aa10.97□□□□□ -0.65
RNU4ATAC2P-201ENST00000408674 PPP6R1Q9UPN7 881 aa10.95□□□□□ -0.66
RNU4ATAC2P-201ENST00000408674 EIF4G1Q04637 1599 aaKnown RBP10.94□□□□□ -0.66
RNU4ATAC2P-201ENST00000408674 ZEB1P37275 1124 aaPredicted RBP10.93□□□□□ -0.66
RNU4ATAC2P-201ENST00000408674 HMGXB3Q12766 1538 aa10.91□□□□□ -0.66
RNU4ATAC2P-201ENST00000408674 HRCP23327 699 aa10.9□□□□□ -0.66
RNU4ATAC2P-201ENST00000408674 WRNQ14191 1432 aaPredicted RBP eCLIP10.9□□□□□ -0.66
RNU4ATAC2P-201ENST00000408674 NCAPD3P42695 1498 aa10.89□□□□□ -0.67
RNU4ATAC2P-201ENST00000408674 ADRA2BP18089 450 aa10.88□□□□□ -0.67
RNU4ATAC2P-201ENST00000408674 CSRNP3Q8WYN3 585 aa10.88□□□□□ -0.67
RNU4ATAC2P-201ENST00000408674 ABCC8Q09428 1581 aa10.84□□□□□ -0.67
RNU4ATAC2P-201ENST00000408674 UBTFP17480 764 aaKnown RBP10.82□□□□□ -0.68
RNU4ATAC2P-201ENST00000408674 TNIKQ9UKE5 1360 aa10.81□□□□□ -0.68
RNU4ATAC2P-201ENST00000408674 GOLGA3Q08378 1498 aa10.8□□□□□ -0.68
RNU4ATAC2P-201ENST00000408674 CEP164Q9UPV0 1460 aa10.79□□□□□ -0.68
RNU4ATAC2P-201ENST00000408674 APLP2Q06481 763 aa10.76□□□□□ -0.69
RNU4ATAC2P-201ENST00000408674 EHMT2Q96KQ7 1210 aa10.75□□□□□ -0.69
RNU4ATAC2P-201ENST00000408674 TOP2BQ02880 1626 aa10.73□□□□□ -0.69
RNU4ATAC2P-201ENST00000408674 SOGA1O94964 1423 aa10.73□□□□□ -0.69
RNU4ATAC2P-201ENST00000408674 KIF21BO75037 1637 aa10.73□□□□□ -0.69
RNU4ATAC2P-201ENST00000408674 PRDM2Q13029 1718 aa10.72□□□□□ -0.69
RNU4ATAC2P-201ENST00000408674 CFTRP13569 1480 aa10.71□□□□□ -0.69
RNU4ATAC2P-201ENST00000408674 CEP162Q5TB80 1403 aa10.71□□□□□ -0.69
RNU4ATAC2P-201ENST00000408674 BIVM-ERCC5R4GMW8 1640 aa10.7□□□□□ -0.7
RNU4ATAC2P-201ENST00000408674 SYNJ1O43426 1573 aa10.69□□□□□ -0.7
RNU4ATAC2P-201ENST00000408674 KIF27Q86VH2 1401 aa10.67□□□□□ -0.7
RNU4ATAC2P-201ENST00000408674 CADPSQ9ULU8 1353 aa10.66□□□□□ -0.7
RNU4ATAC2P-201ENST00000408674 ERICH3Q5RHP9 1530 aa10.63□□□□□ -0.71
RNU4ATAC2P-201ENST00000408674 CC2D2AQ9P2K1 1620 aa10.62□□□□□ -0.71
RNU4ATAC2P-201ENST00000408674 CLIP1P30622 1438 aa10.61□□□□□ -0.71
RNU4ATAC2P-201ENST00000408674 RUSC2Q8N2Y8 1516 aa10.58□□□□□ -0.72
RNU4ATAC2P-201ENST00000408674 CUX1P39880 1505 aa10.55□□□□□ -0.72
RNU4ATAC2P-201ENST00000408674 CCER1Q8TC90 406 aaPredicted RBP10.55□□□□□ -0.72
RNU4ATAC2P-201ENST00000408674 VPS8Q8N3P4 1428 aa10.55□□□□□ -0.72
RNU4ATAC2P-201ENST00000408674 LAMC3Q9Y6N6 1575 aa10.53□□□□□ -0.72
RNU4ATAC2P-201ENST00000408674 PRXQ9BXM0 1461 aa10.53□□□□□ -0.72
RNU4ATAC2P-201ENST00000408674 PDS5BQ9NTI5 1447 aa10.51□□□□□ -0.73
RNU4ATAC2P-201ENST00000408674 FANCD2Q9BXW9 1451 aa10.51□□□□□ -0.73
RNU4ATAC2P-201ENST00000408674 RAPGEF2Q9Y4G8 1499 aa10.51□□□□□ -0.73
RNU4ATAC2P-201ENST00000408674 PPARGC1BQ86YN6 1023 aaKnown RBP10.48□□□□□ -0.73
RNU4ATAC2P-201ENST00000408674 CUX2O14529 1486 aa10.48□□□□□ -0.73
RNU4ATAC2P-201ENST00000408674 DNMBPQ6XZF7 1577 aa10.48□□□□□ -0.73
RNU4ATAC2P-201ENST00000408674 CARMIL1Q5VZK9 1371 aa10.46□□□□□ -0.74
RNU4ATAC2P-201ENST00000408674 FGD5Q6ZNL6 1462 aa10.45□□□□□ -0.74
RNU4ATAC2P-201ENST00000408674 FHAD1B1AJZ9 1412 aa10.43□□□□□ -0.74
RNU4ATAC2P-201ENST00000408674 IGF1RP08069 1367 aa10.42□□□□□ -0.74
RNU4ATAC2P-201ENST00000408674 CUL7Q14999 1698 aa10.42□□□□□ -0.74
RNU4ATAC2P-201ENST00000408674 RANGAP1P46060 587 aaPredicted RBP10.42□□□□□ -0.74
RNU4ATAC2P-201ENST00000408674 ABCA10Q8WWZ4 1543 aa10.41□□□□□ -0.74
RNU4ATAC2P-201ENST00000408674 TOPBP1Q92547 1522 aa10.39□□□□□ -0.75
RNU4ATAC2P-201ENST00000408674 MAP3K1Q13233 1512 aa10.38□□□□□ -0.75
RNU4ATAC2P-201ENST00000408674 TTBK1Q5TCY1 1321 aaPredicted RBP10.38□□□□□ -0.75
RNU4ATAC2P-201ENST00000408674 CLSPNQ9HAW4 1339 aa10.38□□□□□ -0.75
RNU4ATAC2P-201ENST00000408674 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.37□□□□□ -0.75
RNU4ATAC2P-201ENST00000408674 EFCAB5A4FU69 1503 aa10.36□□□□□ -0.75
RNU4ATAC2P-201ENST00000408674 POLA1P09884 1462 aaPredicted RBP10.34□□□□□ -0.75
RNU4ATAC2P-201ENST00000408674 ARAP1Q96P48 1450 aa10.33□□□□□ -0.76
RNU4ATAC2P-201ENST00000408674 HNRNPUL2Q1KMD3 747 aaKnown RBP10.32□□□□□ -0.76
RNU4ATAC2P-201ENST00000408674 FMN1Q68DA7 1419 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 296 ms