RNA–Protein interactions for RNA: ENST00000436426.1

CYCSP11-201, Transcript of cytochrome c, somatic pseudogene 11, humanhuman

BASIC

Gene CYCSP11, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP11-201ENST00000436426 AEBP2Q6ZN18 517 aaPredicted RBP19.49■□□□□ 0.71
CYCSP11-201ENST00000436426 CHIC1Q5VXU3 224 aa19.2■□□□□ 0.66
CYCSP11-201ENST00000436426 PHF23Q9BUL5 403 aaPredicted RBP16.91■□□□□ 0.3
CYCSP11-201ENST00000436426 SENP3Q9H4L4 574 aaPredicted RBP16.51■□□□□ 0.23
CYCSP11-201ENST00000436426 PLPPR3Q6T4P5 718 aa15.69■□□□□ 0.1
CYCSP11-201ENST00000436426 FOXD1Q16676 465 aa15.31■□□□□ 0.04
CYCSP11-201ENST00000436426 ADRA2BP18089 450 aa14.9□□□□□ -0.02
CYCSP11-201ENST00000436426 PPP6R1Q9UPN7 881 aa14.88□□□□□ -0.03
CYCSP11-201ENST00000436426 PIAS4Q8N2W9 510 aaPredicted RBP14.51□□□□□ -0.09
CYCSP11-201ENST00000436426 MSH5O43196 834 aa14.04□□□□□ -0.16
CYCSP11-201ENST00000436426 PPP4R3CPQ6ZMV5 832 aa13.86□□□□□ -0.19
CYCSP11-201ENST00000436426 KCNA4P22459 653 aa13.75□□□□□ -0.21
CYCSP11-201ENST00000436426 SCAF1Q9H7N4 1312 aaKnown RBP13.63□□□□□ -0.23
CYCSP11-201ENST00000436426 NCBP3Q53F19 620 aaKnown RBP13.56□□□□□ -0.24
CYCSP11-201ENST00000436426 MAPK8IP2Q13387 824 aaPredicted RBP13.47□□□□□ -0.25
CYCSP11-201ENST00000436426 CNKSR2Q8WXI2 1034 aa13.42□□□□□ -0.26
CYCSP11-201ENST00000436426 NPM3O75607 178 aaKnown RBP13.34□□□□□ -0.27
CYCSP11-201ENST00000436426 DMRT2Q9Y5R5 561 aa13.2□□□□□ -0.3
CYCSP11-201ENST00000436426 SLC4A1APQ9BWU0 796 aaKnown RBP13.14□□□□□ -0.31
CYCSP11-201ENST00000436426 RNF216Q9NWF9 866 aaPredicted RBP13.1□□□□□ -0.31
CYCSP11-201ENST00000436426 EHMT2Q96KQ7 1210 aa13□□□□□ -0.33
CYCSP11-201ENST00000436426 HOXD11P31277 338 aaPredicted RBP12.99□□□□□ -0.33
CYCSP11-201ENST00000436426 DNAJC5BQ9UF47 199 aa12.83□□□□□ -0.36
CYCSP11-201ENST00000436426 DCAF8L1A6NGE4 600 aa12.72□□□□□ -0.37
CYCSP11-201ENST00000436426 CSRNP3Q8WYN3 585 aa12.72□□□□□ -0.37
CYCSP11-201ENST00000436426 ZBTB22O15209 634 aa12.63□□□□□ -0.39
CYCSP11-201ENST00000436426 FOXD4L1Q9NU39 408 aa12.59□□□□□ -0.39
CYCSP11-201ENST00000436426 SLC4A2P04920 1241 aa12.54□□□□□ -0.4
CYCSP11-201ENST00000436426 POTEDQ86YR6 584 aa12.49□□□□□ -0.41
CYCSP11-201ENST00000436426 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.45□□□□□ -0.42
CYCSP11-201ENST00000436426 MYCNP04198 464 aaPredicted RBP12.32□□□□□ -0.44
CYCSP11-201ENST00000436426 U3KPZ7 1027 aaPredicted RBP12.22□□□□□ -0.45
CYCSP11-201ENST00000436426 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.14□□□□□ -0.47
CYCSP11-201ENST00000436426 HNRNPUL2Q1KMD3 747 aaKnown RBP12.14□□□□□ -0.47
CYCSP11-201ENST00000436426 ATXN8OSP0DMR3 200 aa12.11□□□□□ -0.47
CYCSP11-201ENST00000436426 SAMD1Q6SPF0 538 aaPredicted RBP12.1□□□□□ -0.47
CYCSP11-201ENST00000436426 RNF39Q9H2S5 420 aa12.04□□□□□ -0.48
CYCSP11-201ENST00000436426 ATF5Q9Y2D1 282 aaPredicted RBP11.99□□□□□ -0.49
CYCSP11-201ENST00000436426 APLP2Q06481 763 aa11.97□□□□□ -0.49
CYCSP11-201ENST00000436426 C1QBPQ07021 282 aaKnown RBP11.91□□□□□ -0.5
CYCSP11-201ENST00000436426 SPINK5Q9NQ38 1064 aaPredicted RBP11.85□□□□□ -0.51
CYCSP11-201ENST00000436426 CAPN15O75808 1086 aa11.82□□□□□ -0.52
CYCSP11-201ENST00000436426 TRHP20396 242 aaPredicted RBP11.82□□□□□ -0.52
CYCSP11-201ENST00000436426 NISCHQ9Y2I1 1504 aa11.81□□□□□ -0.52
CYCSP11-201ENST00000436426 ZNF219Q9P2Y4 722 aaPredicted RBP11.79□□□□□ -0.52
CYCSP11-201ENST00000436426 CACNB1Q02641 598 aaPredicted RBP11.66□□□□□ -0.54
CYCSP11-201ENST00000436426 POLA2Q14181 598 aa11.65□□□□□ -0.54
CYCSP11-201ENST00000436426 SLC24A1O60721 1099 aa11.62□□□□□ -0.55
CYCSP11-201ENST00000436426 ABCB7O75027 752 aa11.62□□□□□ -0.55
CYCSP11-201ENST00000436426 DSG3P32926 999 aa11.53□□□□□ -0.56
CYCSP11-201ENST00000436426 FKBP8Q14318 412 aa11.52□□□□□ -0.57
CYCSP11-201ENST00000436426 FBLN2P98095 1184 aa11.5□□□□□ -0.57
CYCSP11-201ENST00000436426 MKRN4PQ13434 485 aaPredicted RBP11.46□□□□□ -0.57
CYCSP11-201ENST00000436426 ZBTB12Q9Y330 459 aaPredicted RBP11.43□□□□□ -0.58
CYCSP11-201ENST00000436426 SPDYE4A6NLX3 237 aa11.32□□□□□ -0.6
CYCSP11-201ENST00000436426 OSCARQ8IYS5 282 aa11.23□□□□□ -0.61
CYCSP11-201ENST00000436426 ZNF692Q9BU19 519 aaPredicted RBP11.17□□□□□ -0.62
CYCSP11-201ENST00000436426 AMER1Q5JTC6 1135 aaPredicted RBP11.14□□□□□ -0.63
CYCSP11-201ENST00000436426 RTN4Q9NQC3 1192 aaKnown RBP11.14□□□□□ -0.63
CYCSP11-201ENST00000436426 SPDYE2BA6NHP3 402 aa11.13□□□□□ -0.63
CYCSP11-201ENST00000436426 SPDYE6P0CI01 402 aa11.13□□□□□ -0.63
CYCSP11-201ENST00000436426 SPDYE2Q495Y8 402 aa11.13□□□□□ -0.63
CYCSP11-201ENST00000436426 PROM2Q8N271 834 aa11.08□□□□□ -0.64
CYCSP11-201ENST00000436426 SSUH2Q9Y2M2 353 aa11.05□□□□□ -0.64
CYCSP11-201ENST00000436426 FBXO3Q9UK99 471 aa11.04□□□□□ -0.64
CYCSP11-201ENST00000436426 PABPN1Q86U42 306 aaKnown RBP eCLIP11.02□□□□□ -0.65
CYCSP11-201ENST00000436426 RBM42Q9BTD8 480 aaKnown RBP10.99□□□□□ -0.65
CYCSP11-201ENST00000436426 AKT1S1Q96B36 256 aa10.89□□□□□ -0.67
CYCSP11-201ENST00000436426 VASPP50552 380 aaPredicted RBP10.87□□□□□ -0.67
CYCSP11-201ENST00000436426 STAG3Q9UJ98 1225 aa10.85□□□□□ -0.67
CYCSP11-201ENST00000436426 REM2Q8IYK8 340 aaPredicted RBP10.8□□□□□ -0.68
CYCSP11-201ENST00000436426 SPDYE1Q8NFV5 336 aaPredicted RBP10.79□□□□□ -0.68
CYCSP11-201ENST00000436426 CLEC11AQ9Y240 323 aa10.78□□□□□ -0.68
CYCSP11-201ENST00000436426 IFNLR1Q8IU57 520 aaPredicted RBP10.75□□□□□ -0.69
CYCSP11-201ENST00000436426 MIER1Q8N108 512 aa10.75□□□□□ -0.69
CYCSP11-201ENST00000436426 PLCD3Q8N3E9 789 aa10.75□□□□□ -0.69
CYCSP11-201ENST00000436426 KLHL34Q8N239 644 aa10.71□□□□□ -0.69
CYCSP11-201ENST00000436426 PRR29P0C7W0 189 aa10.69□□□□□ -0.7
CYCSP11-201ENST00000436426 PLEKHG5O94827 1062 aa10.68□□□□□ -0.7
CYCSP11-201ENST00000436426 PITPNM1O00562 1244 aa10.67□□□□□ -0.7
CYCSP11-201ENST00000436426 SPOCK2Q92563 424 aa10.61□□□□□ -0.71
CYCSP11-201ENST00000436426 ZBTB47Q9UFB7 747 aaPredicted RBP10.58□□□□□ -0.72
CYCSP11-201ENST00000436426 CREBZFQ9NS37 354 aa10.55□□□□□ -0.72
CYCSP11-201ENST00000436426 CCDC180Q9P1Z9 1646 aa10.53□□□□□ -0.72
CYCSP11-201ENST00000436426 CHADLQ6NUI6 762 aa10.48□□□□□ -0.73
CYCSP11-201ENST00000436426 CHRDL2Q6WN34 429 aa10.47□□□□□ -0.73
CYCSP11-201ENST00000436426 CIZ1Q9ULV3 898 aaPredicted RBP10.45□□□□□ -0.74
CYCSP11-201ENST00000436426 MNX1P50219 401 aaPredicted RBP10.44□□□□□ -0.74
CYCSP11-201ENST00000436426 PKD2Q13563 968 aa10.44□□□□□ -0.74
CYCSP11-201ENST00000436426 PRKAR2AP13861 404 aaKnown RBP10.43□□□□□ -0.74
CYCSP11-201ENST00000436426 NPM1P06748 294 aaKnown RBP eCLIP10.41□□□□□ -0.74
CYCSP11-201ENST00000436426 FXR2P51116 673 aaKnown RBP eCLIP10.41□□□□□ -0.74
CYCSP11-201ENST00000436426 NUBP1P53384 320 aa10.4□□□□□ -0.74
CYCSP11-201ENST00000436426 ECM2O94769 699 aaPredicted RBP10.39□□□□□ -0.75
CYCSP11-201ENST00000436426 DCAF8Q5TAQ9 597 aa10.39□□□□□ -0.75
CYCSP11-201ENST00000436426 PIP4P2Q8N4L2 257 aa10.38□□□□□ -0.75
CYCSP11-201ENST00000436426 DCAF8L2P0C7V8 631 aa10.37□□□□□ -0.75
CYCSP11-201ENST00000436426 FARP1Q9Y4F1 1045 aaPredicted RBP10.37□□□□□ -0.75
CYCSP11-201ENST00000436426 GSE1Q14687 1217 aa10.36□□□□□ -0.75
CYCSP11-201ENST00000436426 FAM212AQ96EL1 285 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms