RNA–Protein interactions for RNA: ENST00000502798.6

SV2C-202, Transcript of synaptic vesicle glycoprotein 2C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SV2C, Length 11,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2C-202ENST00000502798 DCAF8L2P0C7V8 631 aa17.04■□□□□ 0.32
SV2C-202ENST00000502798 PELP1Q8IZL8 1130 aaKnown RBP16.32■□□□□ 0.2
SV2C-202ENST00000502798 EHMT2Q96KQ7 1210 aa15.92■□□□□ 0.14
SV2C-202ENST00000502798 SUPT5HO00267 1087 aaKnown RBP15.88■□□□□ 0.13
SV2C-202ENST00000502798 APLP2Q06481 763 aa15.73■□□□□ 0.11
SV2C-202ENST00000502798 ERICH6Q7L0X2 663 aa15.71■□□□□ 0.11
SV2C-202ENST00000502798 FAM9AQ8IZU1 332 aaPredicted RBP15.69■□□□□ 0.1
SV2C-202ENST00000502798 CCER1Q8TC90 406 aaPredicted RBP15.57■□□□□ 0.08
SV2C-202ENST00000502798 SHROOM4Q9ULL8 1493 aa15.44■□□□□ 0.06
SV2C-202ENST00000502798 TTBK1Q5TCY1 1321 aaPredicted RBP15.41■□□□□ 0.06
SV2C-202ENST00000502798 ATP1B4Q9UN42 357 aaPredicted RBP15.22■□□□□ 0.03
SV2C-202ENST00000502798 CENPBP07199 599 aaPredicted RBP15.21■□□□□ 0.03
SV2C-202ENST00000502798 RANGAP1P46060 587 aaPredicted RBP15.21■□□□□ 0.02
SV2C-202ENST00000502798 PCGF6Q9BYE7 350 aa15.17■□□□□ 0.02
SV2C-202ENST00000502798 MYT1Q01538 1121 aa15.16■□□□□ 0.02
SV2C-202ENST00000502798 NEFLP07196 543 aa15.15■□□□□ 0.02
SV2C-202ENST00000502798 DAXXQ9UER7 740 aaPredicted RBP15.06■□□□□ 0
SV2C-202ENST00000502798 YTHDC1Q96MU7 727 aaKnown RBP14.92□□□□□ -0.02
SV2C-202ENST00000502798 MYT1LQ9UL68 1186 aa14.86□□□□□ -0.03
SV2C-202ENST00000502798 ZEB1P37275 1124 aaPredicted RBP14.82□□□□□ -0.04
SV2C-202ENST00000502798 UBTFP17480 764 aaKnown RBP14.77□□□□□ -0.05
SV2C-202ENST00000502798 POLR3GLQ9BT43 218 aa14.76□□□□□ -0.05
SV2C-202ENST00000502798 CHIC1Q5VXU3 224 aa14.75□□□□□ -0.05
SV2C-202ENST00000502798 SLC4A1APQ9BWU0 796 aaKnown RBP14.69□□□□□ -0.06
SV2C-202ENST00000502798 TRIM41Q8WV44 630 aa14.65□□□□□ -0.06
SV2C-202ENST00000502798 ZNF316A6NFI3 1004 aaPredicted RBP14.64□□□□□ -0.07
SV2C-202ENST00000502798 CNGB1Q14028 1251 aaPredicted RBP14.62□□□□□ -0.07
SV2C-202ENST00000502798 NISCHQ9Y2I1 1504 aa14.62□□□□□ -0.07
SV2C-202ENST00000502798 CLSPNQ9HAW4 1339 aa14.59□□□□□ -0.07
SV2C-202ENST00000502798 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.58□□□□□ -0.07
SV2C-202ENST00000502798 HNRNPUL2Q1KMD3 747 aaKnown RBP14.58□□□□□ -0.07
SV2C-202ENST00000502798 RTL5Q5HYW3 569 aaPredicted RBP14.49□□□□□ -0.09
SV2C-202ENST00000502798 ITGAEP38570 1179 aa14.47□□□□□ -0.09
SV2C-202ENST00000502798 PPARGC1BQ86YN6 1023 aaKnown RBP14.45□□□□□ -0.1
SV2C-202ENST00000502798 SLC24A1O60721 1099 aa14.35□□□□□ -0.11
SV2C-202ENST00000502798 ZBTB47Q9UFB7 747 aaPredicted RBP14.33□□□□□ -0.12
SV2C-202ENST00000502798 BCL11AQ9H165 835 aa14.28□□□□□ -0.12
SV2C-202ENST00000502798 TRIM26Q12899 539 aaPredicted RBP14.1□□□□□ -0.15
SV2C-202ENST00000502798 CANXP27824 592 aaKnown RBP14.09□□□□□ -0.15
SV2C-202ENST00000502798 BCANQ96GW7 911 aa14.08□□□□□ -0.16
SV2C-202ENST00000502798 NEFMP07197 916 aa14.04□□□□□ -0.16
SV2C-202ENST00000502798 HRCP23327 699 aa14.03□□□□□ -0.16
SV2C-202ENST00000502798 FAM50AQ14320 339 aaKnown RBP13.99□□□□□ -0.17
SV2C-202ENST00000502798 TRIM52Q96A61 297 aa13.99□□□□□ -0.17
SV2C-202ENST00000502798 ZNF326Q5BKZ1 582 aaKnown RBP13.98□□□□□ -0.17
SV2C-202ENST00000502798 ANP32BQ92688 251 aaKnown RBP13.95□□□□□ -0.18
SV2C-202ENST00000502798 CDK11AQ9UQ88 783 aaPredicted RBP13.94□□□□□ -0.18
SV2C-202ENST00000502798 HSP90AA1P07900 732 aaKnown RBP13.91□□□□□ -0.18
SV2C-202ENST00000502798 DIEXFQ68CQ4 756 aaKnown RBP13.91□□□□□ -0.18
SV2C-202ENST00000502798 NEUROD1Q13562 356 aa13.91□□□□□ -0.18
SV2C-202ENST00000502798 ANP32CO43423 234 aa13.84□□□□□ -0.19
SV2C-202ENST00000502798 EIF5BO60841 1220 aaKnown RBP13.84□□□□□ -0.19
SV2C-202ENST00000502798 CDK11BP21127 795 aaKnown RBP13.83□□□□□ -0.2
SV2C-202ENST00000502798 ANP32AP39687 249 aaKnown RBP13.82□□□□□ -0.2
SV2C-202ENST00000502798 NPM2Q86SE8 214 aaKnown RBP13.77□□□□□ -0.21
SV2C-202ENST00000502798 FBLN2P98095 1184 aa13.76□□□□□ -0.21
SV2C-202ENST00000502798 PLPPR3Q6T4P5 718 aa13.75□□□□□ -0.21
SV2C-202ENST00000502798 ESF1Q9H501 851 aaKnown RBP13.75□□□□□ -0.21
SV2C-202ENST00000502798 GLIPR1L2Q4G1C9 344 aa13.71□□□□□ -0.21
SV2C-202ENST00000502798 UPF2Q9HAU5 1272 aaKnown RBP13.71□□□□□ -0.21
SV2C-202ENST00000502798 LOC105371045A0A1W2PR82 267 aa13.71□□□□□ -0.21
SV2C-202ENST00000502798 A0A0G2JS52 829 aa13.68□□□□□ -0.22
SV2C-202ENST00000502798 STAG3Q9UJ98 1225 aa13.66□□□□□ -0.22
SV2C-202ENST00000502798 SCAF1Q9H7N4 1312 aaKnown RBP13.65□□□□□ -0.23
SV2C-202ENST00000502798 ARXQ96QS3 562 aa13.62□□□□□ -0.23
SV2C-202ENST00000502798 GTF3C3Q9Y5Q9 886 aa13.61□□□□□ -0.23
SV2C-202ENST00000502798 TULP1O00294 542 aaPredicted RBP13.55□□□□□ -0.24
SV2C-202ENST00000502798 ARID3CA6NKF2 412 aa13.54□□□□□ -0.24
SV2C-202ENST00000502798 CHGAP10645 457 aaKnown RBP13.52□□□□□ -0.24
SV2C-202ENST00000502798 ZNF777Q9ULD5 760 aaPredicted RBP13.51□□□□□ -0.25
SV2C-202ENST00000502798 MYH16Q9H6N6 1097 aa13.46□□□□□ -0.26
SV2C-202ENST00000502798 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.45□□□□□ -0.26
SV2C-202ENST00000502798 NBR1Q14596 966 aa13.45□□□□□ -0.26
SV2C-202ENST00000502798 SALL2Q9Y467 1007 aaPredicted RBP13.44□□□□□ -0.26
SV2C-202ENST00000502798 PLEKHG5O94827 1062 aa13.44□□□□□ -0.26
SV2C-202ENST00000502798 NCBP3Q53F19 620 aaKnown RBP13.42□□□□□ -0.26
SV2C-202ENST00000502798 ZRSR1Q15695 479 aaKnown RBP13.4□□□□□ -0.26
SV2C-202ENST00000502798 ZBTB7CA1YPR0 619 aa13.39□□□□□ -0.27
SV2C-202ENST00000502798 C14orf37Q86TY3 774 aa13.37□□□□□ -0.27
SV2C-202ENST00000502798 P3H3Q8IVL6 736 aa13.37□□□□□ -0.27
SV2C-202ENST00000502798 NCLP19338 710 aaKnown RBP13.36□□□□□ -0.27
SV2C-202ENST00000502798 TNNT2P45379 298 aaPredicted RBP13.35□□□□□ -0.27
SV2C-202ENST00000502798 TRIM44Q96DX7 344 aaPredicted RBP13.35□□□□□ -0.27
SV2C-202ENST00000502798 FAM9BQ8IZU0 186 aa13.35□□□□□ -0.27
SV2C-202ENST00000502798 FKBP8Q14318 412 aa13.34□□□□□ -0.27
SV2C-202ENST00000502798 WDR43Q15061 677 aaKnown RBP eCLIP13.34□□□□□ -0.27
SV2C-202ENST00000502798 HNRNPUQ00839 825 aaKnown RBP eCLIP13.33□□□□□ -0.28
SV2C-202ENST00000502798 CCDC136Q96JN2 1154 aa13.33□□□□□ -0.28
SV2C-202ENST00000502798 NPHP1O15259 732 aa13.32□□□□□ -0.28
SV2C-202ENST00000502798 NPM1P06748 294 aaKnown RBP eCLIP13.32□□□□□ -0.28
SV2C-202ENST00000502798 TMC1Q8TDI8 760 aa13.31□□□□□ -0.28
SV2C-202ENST00000502798 HAP1P54257 671 aaPredicted RBP13.31□□□□□ -0.28
SV2C-202ENST00000502798 TONSLQ96HA7 1378 aa13.3□□□□□ -0.28
SV2C-202ENST00000502798 TPRNQ4KMQ1 711 aa13.3□□□□□ -0.28
SV2C-202ENST00000502798 PABPN1Q86U42 306 aaKnown RBP eCLIP13.29□□□□□ -0.28
SV2C-202ENST00000502798 DNTTIP2Q5QJE6 756 aaKnown RBP13.28□□□□□ -0.28
SV2C-202ENST00000502798 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.28□□□□□ -0.28
SV2C-202ENST00000502798 PTMAP06454 111 aaKnown RBP13.26□□□□□ -0.29
SV2C-202ENST00000502798 SENP3Q9H4L4 574 aaPredicted RBP13.26□□□□□ -0.29
SV2C-202ENST00000502798 TAOK2Q9UL54 1235 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms