RNA–Protein interactions for RNA: ENST00000368918.7

GABPB2-202, Transcript of GA binding protein transcription factor subunit beta 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GABPB2, Length 8,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB2-202ENST00000368918 NISCHQ9Y2I1 1504 aa14.49□□□□□ -0.09
GABPB2-202ENST00000368918 DCAF8L2P0C7V8 631 aa13.12□□□□□ -0.31
GABPB2-202ENST00000368918 CCDC180Q9P1Z9 1646 aa13.12□□□□□ -0.31
GABPB2-202ENST00000368918 DCAF1Q9Y4B6 1507 aa12.55□□□□□ -0.4
GABPB2-202ENST00000368918 MYT1Q01538 1121 aa12.51□□□□□ -0.41
GABPB2-202ENST00000368918 PELP1Q8IZL8 1130 aaKnown RBP12.51□□□□□ -0.41
GABPB2-202ENST00000368918 ZCCHC6Q5VYS8 1495 aaKnown RBP12.34□□□□□ -0.43
GABPB2-202ENST00000368918 MYO15BQ96JP2 1530 aa12.32□□□□□ -0.44
GABPB2-202ENST00000368918 ZEB1P37275 1124 aaPredicted RBP12.28□□□□□ -0.44
GABPB2-202ENST00000368918 ABCC9O60706 1549 aa11.97□□□□□ -0.49
GABPB2-202ENST00000368918 TTBK1Q5TCY1 1321 aaPredicted RBP11.84□□□□□ -0.51
GABPB2-202ENST00000368918 NACADO15069 1562 aa11.83□□□□□ -0.52
GABPB2-202ENST00000368918 CLSPNQ9HAW4 1339 aa11.83□□□□□ -0.52
GABPB2-202ENST00000368918 HRCP23327 699 aa11.8□□□□□ -0.52
GABPB2-202ENST00000368918 SHROOM4Q9ULL8 1493 aa11.75□□□□□ -0.53
GABPB2-202ENST00000368918 RB1CC1Q8TDY2 1594 aa11.7□□□□□ -0.54
GABPB2-202ENST00000368918 PABPN1Q86U42 306 aaKnown RBP eCLIP11.68□□□□□ -0.54
GABPB2-202ENST00000368918 EEA1Q15075 1411 aa11.66□□□□□ -0.54
GABPB2-202ENST00000368918 TRIM26Q12899 539 aaPredicted RBP11.66□□□□□ -0.54
GABPB2-202ENST00000368918 CENPBP07199 599 aaPredicted RBP11.6□□□□□ -0.55
GABPB2-202ENST00000368918 CHIC1Q5VXU3 224 aa11.5□□□□□ -0.57
GABPB2-202ENST00000368918 BAZ1AQ9NRL2 1556 aaPredicted RBP11.48□□□□□ -0.57
GABPB2-202ENST00000368918 SUPT5HO00267 1087 aaKnown RBP11.47□□□□□ -0.57
GABPB2-202ENST00000368918 ACIN1Q9UKV3 1341 aaKnown RBP11.44□□□□□ -0.58
GABPB2-202ENST00000368918 WRNQ14191 1432 aaPredicted RBP eCLIP11.31□□□□□ -0.6
GABPB2-202ENST00000368918 PRDM2Q13029 1718 aa11.29□□□□□ -0.6
GABPB2-202ENST00000368918 SMARCA2P51531 1590 aa11.28□□□□□ -0.6
GABPB2-202ENST00000368918 PCGF6Q9BYE7 350 aa11.25□□□□□ -0.61
GABPB2-202ENST00000368918 TOP2AP11388 1531 aaKnown RBP11.25□□□□□ -0.61
GABPB2-202ENST00000368918 BAZ1BQ9UIG0 1483 aaKnown RBP11.25□□□□□ -0.61
GABPB2-202ENST00000368918 TRIM41Q8WV44 630 aa11.24□□□□□ -0.61
GABPB2-202ENST00000368918 EHMT2Q96KQ7 1210 aa11.23□□□□□ -0.61
GABPB2-202ENST00000368918 MYT1LQ9UL68 1186 aa11.23□□□□□ -0.61
GABPB2-202ENST00000368918 SCRIBQ14160 1630 aa11.22□□□□□ -0.61
GABPB2-202ENST00000368918 KIF21BO75037 1637 aa11.21□□□□□ -0.62
GABPB2-202ENST00000368918 RSF1Q96T23 1441 aaPredicted RBP11.19□□□□□ -0.62
GABPB2-202ENST00000368918 PEG3Q9GZU2 1588 aa11.19□□□□□ -0.62
GABPB2-202ENST00000368918 GOLGA3Q08378 1498 aa11.18□□□□□ -0.62
GABPB2-202ENST00000368918 CCER1Q8TC90 406 aaPredicted RBP11.18□□□□□ -0.62
GABPB2-202ENST00000368918 SMARCA4P51532 1647 aa11.14□□□□□ -0.63
GABPB2-202ENST00000368918 APLP2Q06481 763 aa11.14□□□□□ -0.63
GABPB2-202ENST00000368918 FAM9AQ8IZU1 332 aaPredicted RBP11.1□□□□□ -0.63
GABPB2-202ENST00000368918 CEP164Q9UPV0 1460 aa11.1□□□□□ -0.63
GABPB2-202ENST00000368918 TNIKQ9UKE5 1360 aa11.08□□□□□ -0.64
GABPB2-202ENST00000368918 ERICH3Q5RHP9 1530 aa11.08□□□□□ -0.64
GABPB2-202ENST00000368918 UNC13AQ9UPW8 1703 aa11.05□□□□□ -0.64
GABPB2-202ENST00000368918 RANGAP1P46060 587 aaPredicted RBP11.04□□□□□ -0.64
GABPB2-202ENST00000368918 EIF4G1Q04637 1599 aaKnown RBP11.03□□□□□ -0.64
GABPB2-202ENST00000368918 KIF21AQ7Z4S6 1674 aa11.02□□□□□ -0.65
GABPB2-202ENST00000368918 FBLN2P98095 1184 aa11.01□□□□□ -0.65
GABPB2-202ENST00000368918 TIMELESSQ9UNS1 1208 aa10.98□□□□□ -0.65
GABPB2-202ENST00000368918 MAP3K1Q13233 1512 aa10.97□□□□□ -0.65
GABPB2-202ENST00000368918 BIVM-ERCC5R4GMW8 1640 aa10.92□□□□□ -0.66
GABPB2-202ENST00000368918 ATP1B4Q9UN42 357 aaPredicted RBP10.91□□□□□ -0.66
GABPB2-202ENST00000368918 WIZO95785 1651 aa10.91□□□□□ -0.66
GABPB2-202ENST00000368918 HMGXB3Q12766 1538 aa10.89□□□□□ -0.67
GABPB2-202ENST00000368918 YTHDC1Q96MU7 727 aaKnown RBP10.89□□□□□ -0.67
GABPB2-202ENST00000368918 DIEXFQ68CQ4 756 aaKnown RBP10.87□□□□□ -0.67
GABPB2-202ENST00000368918 CEP162Q5TB80 1403 aa10.86□□□□□ -0.67
GABPB2-202ENST00000368918 VPS8Q8N3P4 1428 aa10.86□□□□□ -0.67
GABPB2-202ENST00000368918 TOP2BQ02880 1626 aa10.85□□□□□ -0.67
GABPB2-202ENST00000368918 ERICH6BQ5W0A0 696 aa10.85□□□□□ -0.67
GABPB2-202ENST00000368918 ZNF316A6NFI3 1004 aaPredicted RBP10.84□□□□□ -0.67
GABPB2-202ENST00000368918 NEFLP07196 543 aa10.84□□□□□ -0.67
GABPB2-202ENST00000368918 ERCC6Q03468 1493 aa10.83□□□□□ -0.68
GABPB2-202ENST00000368918 FHAD1B1AJZ9 1412 aa10.82□□□□□ -0.68
GABPB2-202ENST00000368918 MROH2BQ7Z745 1585 aa10.81□□□□□ -0.68
GABPB2-202ENST00000368918 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.79□□□□□ -0.68
GABPB2-202ENST00000368918 HNRNPUL2Q1KMD3 747 aaKnown RBP10.79□□□□□ -0.68
GABPB2-202ENST00000368918 THOC2Q8NI27 1593 aaKnown RBP10.79□□□□□ -0.68
GABPB2-202ENST00000368918 CLIP1P30622 1438 aa10.77□□□□□ -0.68
GABPB2-202ENST00000368918 EFCAB5A4FU69 1503 aa10.77□□□□□ -0.68
GABPB2-202ENST00000368918 CUL7Q14999 1698 aa10.77□□□□□ -0.69
GABPB2-202ENST00000368918 POLR1AO95602 1720 aaPredicted RBP10.77□□□□□ -0.69
GABPB2-202ENST00000368918 ABCC8Q09428 1581 aa10.76□□□□□ -0.69
GABPB2-202ENST00000368918 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.75□□□□□ -0.69
GABPB2-202ENST00000368918 CSRNP3Q8WYN3 585 aa10.74□□□□□ -0.69
GABPB2-202ENST00000368918 CC2D2AQ9P2K1 1620 aa10.74□□□□□ -0.69
GABPB2-202ENST00000368918 CUX2O14529 1486 aa10.73□□□□□ -0.69
GABPB2-202ENST00000368918 CFAP43Q8NDM7 1665 aa10.72□□□□□ -0.69
GABPB2-202ENST00000368918 CUX1P39880 1505 aa10.72□□□□□ -0.69
GABPB2-202ENST00000368918 TRHP20396 242 aaPredicted RBP10.72□□□□□ -0.69
GABPB2-202ENST00000368918 WDR97A6NE52 1622 aa10.72□□□□□ -0.69
GABPB2-202ENST00000368918 KIF27Q86VH2 1401 aa10.71□□□□□ -0.69
GABPB2-202ENST00000368918 SYNJ1O43426 1573 aa10.71□□□□□ -0.7
GABPB2-202ENST00000368918 CCDC88BA6NC98 1476 aa10.68□□□□□ -0.7
GABPB2-202ENST00000368918 PLPPR3Q6T4P5 718 aa10.68□□□□□ -0.7
GABPB2-202ENST00000368918 CTTNBP2Q8WZ74 1663 aa10.67□□□□□ -0.7
GABPB2-202ENST00000368918 UBTFP17480 764 aaKnown RBP10.66□□□□□ -0.7
GABPB2-202ENST00000368918 ARID4BQ4LE39 1312 aaPredicted RBP10.65□□□□□ -0.7
GABPB2-202ENST00000368918 AQRO60306 1485 aaKnown RBP eCLIP10.65□□□□□ -0.7
GABPB2-202ENST00000368918 CCDC18Q5T9S5 1454 aa10.65□□□□□ -0.71
GABPB2-202ENST00000368918 CECR2Q9BXF3 1484 aa10.6□□□□□ -0.71
GABPB2-202ENST00000368918 RRBP1Q9P2E9 1410 aaKnown RBP10.6□□□□□ -0.71
GABPB2-202ENST00000368918 AEBP2Q6ZN18 517 aaPredicted RBP10.59□□□□□ -0.71
GABPB2-202ENST00000368918 ERICH6Q7L0X2 663 aa10.58□□□□□ -0.72
GABPB2-202ENST00000368918 CCER2I3L3R5 266 aa10.58□□□□□ -0.72
GABPB2-202ENST00000368918 SUPT6HQ7KZ85 1726 aaKnown RBP10.57□□□□□ -0.72
GABPB2-202ENST00000368918 LOC105371045A0A1W2PR82 267 aa10.57□□□□□ -0.72
GABPB2-202ENST00000368918 FYCO1Q9BQS8 1478 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms