RNA–Protein interactions for RNA: ENST00000447384.1

AP001604.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP001604.1, Length 954 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001604.1-201ENST00000447384 AEBP2Q6ZN18 517 aaPredicted RBP20.7■□□□□ 0.9
AP001604.1-201ENST00000447384 CHIC1Q5VXU3 224 aa19.36■□□□□ 0.69
AP001604.1-201ENST00000447384 SENP3Q9H4L4 574 aaPredicted RBP17.78■□□□□ 0.44
AP001604.1-201ENST00000447384 PHF23Q9BUL5 403 aaPredicted RBP17.44■□□□□ 0.38
AP001604.1-201ENST00000447384 FOXD1Q16676 465 aa16.62■□□□□ 0.25
AP001604.1-201ENST00000447384 POTEDQ86YR6 584 aa16.41■□□□□ 0.22
AP001604.1-201ENST00000447384 MSH5O43196 834 aa15.81■□□□□ 0.12
AP001604.1-201ENST00000447384 PLPPR3Q6T4P5 718 aa15.73■□□□□ 0.11
AP001604.1-201ENST00000447384 PIAS4Q8N2W9 510 aaPredicted RBP15.39■□□□□ 0.05
AP001604.1-201ENST00000447384 PPP6R1Q9UPN7 881 aa15.07■□□□□ 0
AP001604.1-201ENST00000447384 ADRA2BP18089 450 aa14.98□□□□□ -0.01
AP001604.1-201ENST00000447384 DMRT2Q9Y5R5 561 aa14.01□□□□□ -0.17
AP001604.1-201ENST00000447384 MAPK8IP2Q13387 824 aaPredicted RBP13.93□□□□□ -0.18
AP001604.1-201ENST00000447384 CACNB1Q02641 598 aaPredicted RBP13.9□□□□□ -0.18
AP001604.1-201ENST00000447384 PPP4R3CPQ6ZMV5 832 aa13.86□□□□□ -0.19
AP001604.1-201ENST00000447384 SCAF1Q9H7N4 1312 aaKnown RBP13.74□□□□□ -0.21
AP001604.1-201ENST00000447384 KCNA4P22459 653 aa13.65□□□□□ -0.22
AP001604.1-201ENST00000447384 NCBP3Q53F19 620 aaKnown RBP13.56□□□□□ -0.24
AP001604.1-201ENST00000447384 CNKSR2Q8WXI2 1034 aa13.46□□□□□ -0.25
AP001604.1-201ENST00000447384 RNF39Q9H2S5 420 aa13.43□□□□□ -0.26
AP001604.1-201ENST00000447384 DCAF8L1A6NGE4 600 aa13.42□□□□□ -0.26
AP001604.1-201ENST00000447384 NPM3O75607 178 aaKnown RBP13.31□□□□□ -0.28
AP001604.1-201ENST00000447384 HOXD11P31277 338 aaPredicted RBP13.26□□□□□ -0.29
AP001604.1-201ENST00000447384 C1QBPQ07021 282 aaKnown RBP13.2□□□□□ -0.3
AP001604.1-201ENST00000447384 RNF216Q9NWF9 866 aaPredicted RBP13.15□□□□□ -0.3
AP001604.1-201ENST00000447384 NISCHQ9Y2I1 1504 aa13.13□□□□□ -0.31
AP001604.1-201ENST00000447384 SLC4A1APQ9BWU0 796 aaKnown RBP13.05□□□□□ -0.32
AP001604.1-201ENST00000447384 DNAJC5BQ9UF47 199 aa12.95□□□□□ -0.34
AP001604.1-201ENST00000447384 EHMT2Q96KQ7 1210 aa12.82□□□□□ -0.36
AP001604.1-201ENST00000447384 POTEHQ6S545 545 aa12.75□□□□□ -0.37
AP001604.1-201ENST00000447384 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.61□□□□□ -0.39
AP001604.1-201ENST00000447384 CSRNP3Q8WYN3 585 aa12.56□□□□□ -0.4
AP001604.1-201ENST00000447384 FOXD4L1Q9NU39 408 aa12.55□□□□□ -0.4
AP001604.1-201ENST00000447384 ZBTB22O15209 634 aa12.52□□□□□ -0.41
AP001604.1-201ENST00000447384 SLC4A2P04920 1241 aa12.52□□□□□ -0.41
AP001604.1-201ENST00000447384 DSG3P32926 999 aa12.36□□□□□ -0.43
AP001604.1-201ENST00000447384 MYCNP04198 464 aaPredicted RBP12.32□□□□□ -0.44
AP001604.1-201ENST00000447384 U3KPZ7 1027 aaPredicted RBP12.29□□□□□ -0.44
AP001604.1-201ENST00000447384 CAPN15O75808 1086 aa12.28□□□□□ -0.44
AP001604.1-201ENST00000447384 SPINK5Q9NQ38 1064 aaPredicted RBP12.27□□□□□ -0.45
AP001604.1-201ENST00000447384 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.2□□□□□ -0.46
AP001604.1-201ENST00000447384 HNRNPUL2Q1KMD3 747 aaKnown RBP12.2□□□□□ -0.46
AP001604.1-201ENST00000447384 SAMD1Q6SPF0 538 aaPredicted RBP12.14□□□□□ -0.47
AP001604.1-201ENST00000447384 ATXN8OSP0DMR3 200 aa12.08□□□□□ -0.48
AP001604.1-201ENST00000447384 APLP2Q06481 763 aa12.06□□□□□ -0.48
AP001604.1-201ENST00000447384 ATF5Q9Y2D1 282 aaPredicted RBP11.95□□□□□ -0.5
AP001604.1-201ENST00000447384 ABCB7O75027 752 aa11.94□□□□□ -0.5
AP001604.1-201ENST00000447384 TRHP20396 242 aaPredicted RBP11.94□□□□□ -0.5
AP001604.1-201ENST00000447384 ZNF219Q9P2Y4 722 aaPredicted RBP11.93□□□□□ -0.5
AP001604.1-201ENST00000447384 RBM42Q9BTD8 480 aaKnown RBP11.84□□□□□ -0.51
AP001604.1-201ENST00000447384 CHRDL2Q6WN34 429 aa11.79□□□□□ -0.52
AP001604.1-201ENST00000447384 SP7Q8TDD2 431 aaPredicted RBP11.68□□□□□ -0.54
AP001604.1-201ENST00000447384 POLA2Q14181 598 aa11.67□□□□□ -0.54
AP001604.1-201ENST00000447384 FBLN2P98095 1184 aa11.52□□□□□ -0.57
AP001604.1-201ENST00000447384 ZBTB12Q9Y330 459 aaPredicted RBP11.5□□□□□ -0.57
AP001604.1-201ENST00000447384 CCDC180Q9P1Z9 1646 aa11.44□□□□□ -0.58
AP001604.1-201ENST00000447384 MKRN4PQ13434 485 aaPredicted RBP11.43□□□□□ -0.58
AP001604.1-201ENST00000447384 AKT1S1Q96B36 256 aa11.43□□□□□ -0.58
AP001604.1-201ENST00000447384 FKBP8Q14318 412 aa11.4□□□□□ -0.58
AP001604.1-201ENST00000447384 PIP4P2Q8N4L2 257 aa11.38□□□□□ -0.59
AP001604.1-201ENST00000447384 HAX1O00165 279 aa11.32□□□□□ -0.6
AP001604.1-201ENST00000447384 REM2Q8IYK8 340 aaPredicted RBP11.31□□□□□ -0.6
AP001604.1-201ENST00000447384 SPDYE4A6NLX3 237 aa11.28□□□□□ -0.6
AP001604.1-201ENST00000447384 OSCARQ8IYS5 282 aa11.27□□□□□ -0.61
AP001604.1-201ENST00000447384 FXR2P51116 673 aaKnown RBP eCLIP11.23□□□□□ -0.61
AP001604.1-201ENST00000447384 PITPNM1O00562 1244 aa11.2□□□□□ -0.62
AP001604.1-201ENST00000447384 SPDYE2BA6NHP3 402 aa11.18□□□□□ -0.62
AP001604.1-201ENST00000447384 SPDYE6P0CI01 402 aa11.18□□□□□ -0.62
AP001604.1-201ENST00000447384 SPDYE2Q495Y8 402 aa11.18□□□□□ -0.62
AP001604.1-201ENST00000447384 ZNF692Q9BU19 519 aaPredicted RBP11.18□□□□□ -0.62
AP001604.1-201ENST00000447384 EVX2Q03828 476 aa11.13□□□□□ -0.63
AP001604.1-201ENST00000447384 SSUH2Q9Y2M2 353 aa11.06□□□□□ -0.64
AP001604.1-201ENST00000447384 PABPN1Q86U42 306 aaKnown RBP eCLIP11.03□□□□□ -0.64
AP001604.1-201ENST00000447384 PROM2Q8N271 834 aa11.02□□□□□ -0.65
AP001604.1-201ENST00000447384 ZCCHC6Q5VYS8 1495 aaKnown RBP11□□□□□ -0.65
AP001604.1-201ENST00000447384 FBXO3Q9UK99 471 aa10.98□□□□□ -0.65
AP001604.1-201ENST00000447384 LHX8Q68G74 356 aa10.94□□□□□ -0.66
AP001604.1-201ENST00000447384 ABCC9O60706 1549 aa10.92□□□□□ -0.66
AP001604.1-201ENST00000447384 DCAF1Q9Y4B6 1507 aa10.92□□□□□ -0.66
AP001604.1-201ENST00000447384 PRKAR2AP13861 404 aaKnown RBP10.9□□□□□ -0.66
AP001604.1-201ENST00000447384 C19orf67A6NJJ6 358 aa10.89□□□□□ -0.67
AP001604.1-201ENST00000447384 STAG3Q9UJ98 1225 aa10.87□□□□□ -0.67
AP001604.1-201ENST00000447384 MYO15BQ96JP2 1530 aa10.87□□□□□ -0.67
AP001604.1-201ENST00000447384 GABBR2O75899 941 aa10.86□□□□□ -0.67
AP001604.1-201ENST00000447384 SPDYE1Q8NFV5 336 aaPredicted RBP10.85□□□□□ -0.67
AP001604.1-201ENST00000447384 CLEC11AQ9Y240 323 aa10.83□□□□□ -0.68
AP001604.1-201ENST00000447384 DCAF8L2P0C7V8 631 aa10.81□□□□□ -0.68
AP001604.1-201ENST00000447384 VASPP50552 380 aaPredicted RBP10.8□□□□□ -0.68
AP001604.1-201ENST00000447384 NACADO15069 1562 aa10.76□□□□□ -0.69
AP001604.1-201ENST00000447384 PRR29P0C7W0 189 aa10.73□□□□□ -0.69
AP001604.1-201ENST00000447384 PLCD3Q8N3E9 789 aa10.73□□□□□ -0.69
AP001604.1-201ENST00000447384 MIER1Q8N108 512 aa10.72□□□□□ -0.69
AP001604.1-201ENST00000447384 PLSCR2Q9NRY7 297 aa10.71□□□□□ -0.69
AP001604.1-201ENST00000447384 PLEKHG5O94827 1062 aa10.69□□□□□ -0.7
AP001604.1-201ENST00000447384 KLHL34Q8N239 644 aa10.65□□□□□ -0.7
AP001604.1-201ENST00000447384 RB1CC1Q8TDY2 1594 aa10.65□□□□□ -0.71
AP001604.1-201ENST00000447384 POTEIP0CG38 1075 aa10.63□□□□□ -0.71
AP001604.1-201ENST00000447384 CHADLQ6NUI6 762 aa10.63□□□□□ -0.71
AP001604.1-201ENST00000447384 IFNLR1Q8IU57 520 aaPredicted RBP10.63□□□□□ -0.71
AP001604.1-201ENST00000447384 ZBTB47Q9UFB7 747 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms