RNA–Protein interactions for RNA: ENST00000302401.8

SMARCA2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2 BASIC

Gene SMARCA2, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-201ENST00000302401 AEBP2Q6ZN18 517 aaPredicted RBP16.69■□□□□ 0.26
SMARCA2-201ENST00000302401 CHIC1Q5VXU3 224 aa15.91■□□□□ 0.14
SMARCA2-201ENST00000302401 SENP3Q9H4L4 574 aaPredicted RBP14.56□□□□□ -0.08
SMARCA2-201ENST00000302401 POTEDQ86YR6 584 aa14.33□□□□□ -0.12
SMARCA2-201ENST00000302401 PHF23Q9BUL5 403 aaPredicted RBP14.15□□□□□ -0.14
SMARCA2-201ENST00000302401 FOXD1Q16676 465 aa13.57□□□□□ -0.24
SMARCA2-201ENST00000302401 PLPPR3Q6T4P5 718 aa13.29□□□□□ -0.28
SMARCA2-201ENST00000302401 MSH5O43196 834 aa13.2□□□□□ -0.3
SMARCA2-201ENST00000302401 EHMT2Q96KQ7 1210 aa12.89□□□□□ -0.35
SMARCA2-201ENST00000302401 KCNA4P22459 653 aa12.65□□□□□ -0.38
SMARCA2-201ENST00000302401 PIAS4Q8N2W9 510 aaPredicted RBP12.5□□□□□ -0.41
SMARCA2-201ENST00000302401 ADRA2BP18089 450 aa12.49□□□□□ -0.41
SMARCA2-201ENST00000302401 CSRNP3Q8WYN3 585 aa12.36□□□□□ -0.43
SMARCA2-201ENST00000302401 PPP6R1Q9UPN7 881 aa12.18□□□□□ -0.46
SMARCA2-201ENST00000302401 SLC4A1APQ9BWU0 796 aaKnown RBP12.17□□□□□ -0.46
SMARCA2-201ENST00000302401 SLC24A1O60721 1099 aa12.09□□□□□ -0.47
SMARCA2-201ENST00000302401 PPP4R3CPQ6ZMV5 832 aa11.86□□□□□ -0.51
SMARCA2-201ENST00000302401 CACNB1Q02641 598 aaPredicted RBP11.85□□□□□ -0.51
SMARCA2-201ENST00000302401 NCBP3Q53F19 620 aaKnown RBP11.75□□□□□ -0.53
SMARCA2-201ENST00000302401 RTN4Q9NQC3 1192 aaKnown RBP11.75□□□□□ -0.53
SMARCA2-201ENST00000302401 ZBTB22O15209 634 aa11.7□□□□□ -0.54
SMARCA2-201ENST00000302401 AMER1Q5JTC6 1135 aaPredicted RBP11.68□□□□□ -0.54
SMARCA2-201ENST00000302401 NPM3O75607 178 aaKnown RBP11.66□□□□□ -0.54
SMARCA2-201ENST00000302401 DMRT2Q9Y5R5 561 aa11.36□□□□□ -0.59
SMARCA2-201ENST00000302401 FOXD4L1Q9NU39 408 aa11.33□□□□□ -0.59
SMARCA2-201ENST00000302401 CNKSR2Q8WXI2 1034 aa11.3□□□□□ -0.6
SMARCA2-201ENST00000302401 DNAJC5BQ9UF47 199 aa11.18□□□□□ -0.62
SMARCA2-201ENST00000302401 MAPK8IP2Q13387 824 aaPredicted RBP11.13□□□□□ -0.63
SMARCA2-201ENST00000302401 RNF39Q9H2S5 420 aa11.09□□□□□ -0.63
SMARCA2-201ENST00000302401 POTEHQ6S545 545 aa11.08□□□□□ -0.64
SMARCA2-201ENST00000302401 FKBP8Q14318 412 aa11.07□□□□□ -0.64
SMARCA2-201ENST00000302401 SCAF1Q9H7N4 1312 aaKnown RBP11.07□□□□□ -0.64
SMARCA2-201ENST00000302401 C1QBPQ07021 282 aaKnown RBP10.95□□□□□ -0.66
SMARCA2-201ENST00000302401 DCAF8L1A6NGE4 600 aa10.94□□□□□ -0.66
SMARCA2-201ENST00000302401 RNF216Q9NWF9 866 aaPredicted RBP10.86□□□□□ -0.67
SMARCA2-201ENST00000302401 ATXN8OSP0DMR3 200 aa10.85□□□□□ -0.67
SMARCA2-201ENST00000302401 SLC4A2P04920 1241 aa10.81□□□□□ -0.68
SMARCA2-201ENST00000302401 PLCB2Q00722 1185 aa10.76□□□□□ -0.69
SMARCA2-201ENST00000302401 MYCNP04198 464 aaPredicted RBP10.71□□□□□ -0.69
SMARCA2-201ENST00000302401 PRKCSHP14314 528 aaPredicted RBP10.67□□□□□ -0.7
SMARCA2-201ENST00000302401 DAXXQ9UER7 740 aaPredicted RBP10.62□□□□□ -0.71
SMARCA2-201ENST00000302401 BCANQ96GW7 911 aa10.62□□□□□ -0.71
SMARCA2-201ENST00000302401 HOXD11P31277 338 aaPredicted RBP10.59□□□□□ -0.71
SMARCA2-201ENST00000302401 HAP1P54257 671 aaPredicted RBP10.58□□□□□ -0.72
SMARCA2-201ENST00000302401 TAOK2Q9UL54 1235 aa10.57□□□□□ -0.72
SMARCA2-201ENST00000302401 VSIG10Q8N0Z9 540 aa10.46□□□□□ -0.74
SMARCA2-201ENST00000302401 ATF5Q9Y2D1 282 aaPredicted RBP10.43□□□□□ -0.74
SMARCA2-201ENST00000302401 TPRNQ4KMQ1 711 aa10.38□□□□□ -0.75
SMARCA2-201ENST00000302401 FBXO3Q9UK99 471 aa10.38□□□□□ -0.75
SMARCA2-201ENST00000302401 DCAF8L2P0C7V8 631 aa10.34□□□□□ -0.75
SMARCA2-201ENST00000302401 KDM2AQ9Y2K7 1162 aa10.29□□□□□ -0.76
SMARCA2-201ENST00000302401 VASPP50552 380 aaPredicted RBP10.26□□□□□ -0.77
SMARCA2-201ENST00000302401 PKD2Q13563 968 aa10.25□□□□□ -0.77
SMARCA2-201ENST00000302401 ARXQ96QS3 562 aa10.23□□□□□ -0.77
SMARCA2-201ENST00000302401 IFNLR1Q8IU57 520 aaPredicted RBP10.22□□□□□ -0.77
SMARCA2-201ENST00000302401 TIMELESSQ9UNS1 1208 aa10.22□□□□□ -0.77
SMARCA2-201ENST00000302401 FBLN2P98095 1184 aa10.21□□□□□ -0.77
SMARCA2-201ENST00000302401 PROM2Q8N271 834 aa10.19□□□□□ -0.78
SMARCA2-201ENST00000302401 SPDYE4A6NLX3 237 aa10.18□□□□□ -0.78
SMARCA2-201ENST00000302401 SAMD1Q6SPF0 538 aaPredicted RBP10.17□□□□□ -0.78
SMARCA2-201ENST00000302401 BBXQ8WY36 941 aaPredicted RBP10.15□□□□□ -0.78
SMARCA2-201ENST00000302401 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.15□□□□□ -0.78
SMARCA2-201ENST00000302401 HNRNPUL2Q1KMD3 747 aaKnown RBP10.15□□□□□ -0.78
SMARCA2-201ENST00000302401 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.14□□□□□ -0.79
SMARCA2-201ENST00000302401 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.11□□□□□ -0.79
SMARCA2-201ENST00000302401 PAXIP1Q6ZW49 1069 aaPredicted RBP10.1□□□□□ -0.79
SMARCA2-201ENST00000302401 ZNF219Q9P2Y4 722 aaPredicted RBP10.09□□□□□ -0.79
SMARCA2-201ENST00000302401 NPM1P06748 294 aaKnown RBP eCLIP10.09□□□□□ -0.79
SMARCA2-201ENST00000302401 TULP1O00294 542 aaPredicted RBP10.07□□□□□ -0.8
SMARCA2-201ENST00000302401 CFAP44Q96MT7 982 aa10.06□□□□□ -0.8
SMARCA2-201ENST00000302401 DSG3P32926 999 aa10.06□□□□□ -0.8
SMARCA2-201ENST00000302401 U3KPZ7 1027 aaPredicted RBP10.04□□□□□ -0.8
SMARCA2-201ENST00000302401 MKRN4PQ13434 485 aaPredicted RBP10.02□□□□□ -0.81
SMARCA2-201ENST00000302401 TSHZ2Q9NRE2 1034 aa10□□□□□ -0.81
SMARCA2-201ENST00000302401 GTF3C3Q9Y5Q9 886 aa9.99□□□□□ -0.81
SMARCA2-201ENST00000302401 SP7Q8TDD2 431 aaPredicted RBP9.97□□□□□ -0.81
SMARCA2-201ENST00000302401 ECM2O94769 699 aaPredicted RBP9.96□□□□□ -0.82
SMARCA2-201ENST00000302401 SPRYD3Q8NCJ5 442 aa9.95□□□□□ -0.82
SMARCA2-201ENST00000302401 CAPN15O75808 1086 aa9.94□□□□□ -0.82
SMARCA2-201ENST00000302401 HOMEZQ8IX15 550 aa9.91□□□□□ -0.82
SMARCA2-201ENST00000302401 DNAJC5Q9H3Z4 198 aa9.9□□□□□ -0.82
SMARCA2-201ENST00000302401 NBR1Q14596 966 aa9.9□□□□□ -0.83
SMARCA2-201ENST00000302401 SPOCK2Q92563 424 aa9.9□□□□□ -0.83
SMARCA2-201ENST00000302401 ERICH6Q7L0X2 663 aa9.89□□□□□ -0.83
SMARCA2-201ENST00000302401 RGL2O15211 777 aa9.87□□□□□ -0.83
SMARCA2-201ENST00000302401 KLHL34Q8N239 644 aa9.83□□□□□ -0.84
SMARCA2-201ENST00000302401 CHRDL2Q6WN34 429 aa9.82□□□□□ -0.84
SMARCA2-201ENST00000302401 SPINK5Q9NQ38 1064 aaPredicted RBP9.82□□□□□ -0.84
SMARCA2-201ENST00000302401 APLP2Q06481 763 aa9.79□□□□□ -0.84
SMARCA2-201ENST00000302401 TMEM132AQ24JP5 1023 aa9.79□□□□□ -0.84
SMARCA2-201ENST00000302401 RBM42Q9BTD8 480 aaKnown RBP9.76□□□□□ -0.85
SMARCA2-201ENST00000302401 CHGAP10645 457 aaKnown RBP9.75□□□□□ -0.85
SMARCA2-201ENST00000302401 RANGAP1P46060 587 aaPredicted RBP9.7□□□□□ -0.86
SMARCA2-201ENST00000302401 C14orf37Q86TY3 774 aa9.67□□□□□ -0.86
SMARCA2-201ENST00000302401 HS6ST3Q8IZP7 471 aa9.63□□□□□ -0.87
SMARCA2-201ENST00000302401 STAG3Q9UJ98 1225 aa9.63□□□□□ -0.87
SMARCA2-201ENST00000302401 POLA2Q14181 598 aa9.62□□□□□ -0.87
SMARCA2-201ENST00000302401 PODXL2Q9NZ53 605 aa9.62□□□□□ -0.87
SMARCA2-201ENST00000302401 PLCD3Q8N3E9 789 aa9.61□□□□□ -0.87
SMARCA2-201ENST00000302401 CIZ1Q9ULV3 898 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms