Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 LINC01808-202ENST00000641680 1116 ntBASIC7.2□□□□□ -1.26
SOX1O00570 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SOX1O00570 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC7.2□□□□□ -1.26
SOX1O00570 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SOX1O00570 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC7.2□□□□□ -1.26
SOX1O00570 MARK2P4-201ENST00000503381 2380 ntBASIC7.2□□□□□ -1.26
SOX1O00570 AC005614.1-201ENST00000598952 3653 ntBASIC7.2□□□□□ -1.26
SOX1O00570 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC7.2□□□□□ -1.26
SOX1O00570 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.2□□□□□ -1.26
SOX1O00570 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SOX1O00570 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SOX1O00570 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
SOX1O00570 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SOX1O00570 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
SOX1O00570 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
SOX1O00570 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SOX1O00570 AC017007.4-201ENST00000503353 1352 ntBASIC7.2□□□□□ -1.26
SOX1O00570 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC7.2□□□□□ -1.26
SOX1O00570 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SOX1O00570 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SOX1O00570 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.19□□□□□ -1.26
SOX1O00570 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SOX1O00570 TTC39DP-201ENST00000416781 1688 ntBASIC7.19□□□□□ -1.26
SOX1O00570 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
SOX1O00570 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SOX1O00570 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SOX1O00570 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.19□□□□□ -1.26
SOX1O00570 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
SOX1O00570 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SOX1O00570 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SOX1O00570 AC016716.1-201ENST00000265882 708 ntBASIC7.19□□□□□ -1.26
SOX1O00570 AL035419.1-201ENST00000397037 564 ntBASIC7.19□□□□□ -1.26
SOX1O00570 RNU2-66P-201ENST00000410650 161 ntBASIC7.19□□□□□ -1.26
SOX1O00570 MTCO1P17-201ENST00000411522 491 ntBASIC7.19□□□□□ -1.26
SOX1O00570 RPL26P37-201ENST00000411983 438 ntBASIC7.19□□□□□ -1.26
SOX1O00570 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC7.19□□□□□ -1.26
SOX1O00570 CCDC58P2-201ENST00000417131 366 ntBASIC7.19□□□□□ -1.26
SOX1O00570 FNDC3CP-201ENST00000420795 1155 ntBASIC7.19□□□□□ -1.26
SOX1O00570 GAPDHP57-201ENST00000424400 585 ntBASIC7.19□□□□□ -1.26
SOX1O00570 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC7.19□□□□□ -1.26
SOX1O00570 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC7.19□□□□□ -1.26
SOX1O00570 AC083862.1-201ENST00000427378 1242 ntBASIC7.19□□□□□ -1.26
SOX1O00570 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.19□□□□□ -1.26
SOX1O00570 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC7.19□□□□□ -1.26
SOX1O00570 AC023271.1-201ENST00000445936 1090 ntBASIC7.19□□□□□ -1.26
SOX1O00570 AP000542.1-201ENST00000448473 371 ntBASIC7.19□□□□□ -1.26
SOX1O00570 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC7.19□□□□□ -1.26
SOX1O00570 AC108688.1-201ENST00000485817 713 ntBASIC7.19□□□□□ -1.26
SOX1O00570 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC7.19□□□□□ -1.26
SOX1O00570 RN7SKP238-201ENST00000516483 249 ntBASIC7.19□□□□□ -1.26
SOX1O00570 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.19□□□□□ -1.26
SOX1O00570 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC7.19□□□□□ -1.26
SOX1O00570 AL133399.1-201ENST00000527476 298 ntBASIC7.19□□□□□ -1.26
SOX1O00570 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC7.19□□□□□ -1.26
SOX1O00570 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC7.19□□□□□ -1.26
SOX1O00570 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC7.19□□□□□ -1.26
SOX1O00570 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC7.19□□□□□ -1.26
SOX1O00570 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SOX1O00570 AC084757.1-201ENST00000559987 490 ntBASIC7.19□□□□□ -1.26
SOX1O00570 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.19□□□□□ -1.26
SOX1O00570 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC7.19□□□□□ -1.26
SOX1O00570 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SOX1O00570 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC7.19□□□□□ -1.26
SOX1O00570 AC004805.3-201ENST00000603178 310 ntBASIC7.19□□□□□ -1.26
SOX1O00570 AC024940.4-201ENST00000605507 246 ntBASIC7.19□□□□□ -1.26
SOX1O00570 AL391497.1-201ENST00000608671 547 ntBASIC7.19□□□□□ -1.26
SOX1O00570 AC073569.3-201ENST00000619055 682 ntBASIC7.19□□□□□ -1.26
SOX1O00570 MIR6811-201ENST00000620409 58 ntBASIC7.19□□□□□ -1.26
SOX1O00570 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC7.19□□□□□ -1.26
SOX1O00570 AC022509.4-201ENST00000621404 572 ntBASIC7.19□□□□□ -1.26
SOX1O00570 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC7.19□□□□□ -1.26
SOX1O00570 OR5AK4P-201ENST00000635912 903 ntBASIC7.19□□□□□ -1.26
SOX1O00570 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC7.19□□□□□ -1.26
SOX1O00570 NCOA4P2-201ENST00000340589 1813 ntBASIC7.19□□□□□ -1.26
SOX1O00570 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SOX1O00570 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SOX1O00570 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
SOX1O00570 OR4C1P-202ENST00000641065 1569 ntBASIC7.19□□□□□ -1.26
SOX1O00570 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
SOX1O00570 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SOX1O00570 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SOX1O00570 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SOX1O00570 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC7.19□□□□□ -1.26
SOX1O00570 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.19□□□□□ -1.26
SOX1O00570 AC129502.1-201ENST00000623261 1654 ntBASIC7.19□□□□□ -1.26
SOX1O00570 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.18□□□□□ -1.26
SOX1O00570 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SOX1O00570 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SOX1O00570 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC7.18□□□□□ -1.26
SOX1O00570 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
SOX1O00570 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
SOX1O00570 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.18□□□□□ -1.26
SOX1O00570 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC7.18□□□□□ -1.26
SOX1O00570 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SOX1O00570 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SOX1O00570 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SOX1O00570 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.18□□□□□ -1.26
SOX1O00570 AC012360.3-201ENST00000610036 3449 ntBASIC7.18□□□□□ -1.26
SOX1O00570 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
SOX1O00570 OR52B3P-201ENST00000314715 928 ntBASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms