RNA–Protein interactions for RNA: ENST00000416781.1

TTC39DP-201, Transcript of tetratricopeptide repeat domain 39D, pseudogene, humanhuman

BASIC

Gene TTC39DP, Length 1,688 nt, Biotype unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39DP-201ENST00000416781 AEBP2Q6ZN18 517 aaPredicted RBP21.38■■□□□ 1.01
TTC39DP-201ENST00000416781 CHIC1Q5VXU3 224 aa20.88■□□□□ 0.93
TTC39DP-201ENST00000416781 SENP3Q9H4L4 574 aaPredicted RBP18.6■□□□□ 0.57
TTC39DP-201ENST00000416781 PHF23Q9BUL5 403 aaPredicted RBP18.37■□□□□ 0.53
TTC39DP-201ENST00000416781 POTEDQ86YR6 584 aa17.76■□□□□ 0.43
TTC39DP-201ENST00000416781 FOXD1Q16676 465 aa17.31■□□□□ 0.36
TTC39DP-201ENST00000416781 PLPPR3Q6T4P5 718 aa17.07■□□□□ 0.32
TTC39DP-201ENST00000416781 MSH5O43196 834 aa16.73■□□□□ 0.27
TTC39DP-201ENST00000416781 ADRA2BP18089 450 aa16.14■□□□□ 0.18
TTC39DP-201ENST00000416781 PPP6R1Q9UPN7 881 aa16.13■□□□□ 0.17
TTC39DP-201ENST00000416781 PIAS4Q8N2W9 510 aaPredicted RBP16.02■□□□□ 0.15
TTC39DP-201ENST00000416781 PPP4R3CPQ6ZMV5 832 aa15.06■□□□□ 0
TTC39DP-201ENST00000416781 KCNA4P22459 653 aa14.99□□□□□ -0.01
TTC39DP-201ENST00000416781 CACNB1Q02641 598 aaPredicted RBP14.87□□□□□ -0.03
TTC39DP-201ENST00000416781 SCAF1Q9H7N4 1312 aaKnown RBP14.78□□□□□ -0.04
TTC39DP-201ENST00000416781 NCBP3Q53F19 620 aaKnown RBP14.75□□□□□ -0.05
TTC39DP-201ENST00000416781 CNKSR2Q8WXI2 1034 aa14.58□□□□□ -0.07
TTC39DP-201ENST00000416781 MAPK8IP2Q13387 824 aaPredicted RBP14.57□□□□□ -0.08
TTC39DP-201ENST00000416781 DMRT2Q9Y5R5 561 aa14.55□□□□□ -0.08
TTC39DP-201ENST00000416781 NPM3O75607 178 aaKnown RBP14.52□□□□□ -0.08
TTC39DP-201ENST00000416781 SLC4A1APQ9BWU0 796 aaKnown RBP14.33□□□□□ -0.12
TTC39DP-201ENST00000416781 RNF216Q9NWF9 866 aaPredicted RBP14.24□□□□□ -0.13
TTC39DP-201ENST00000416781 EHMT2Q96KQ7 1210 aa14.21□□□□□ -0.13
TTC39DP-201ENST00000416781 HOXD11P31277 338 aaPredicted RBP14.11□□□□□ -0.15
TTC39DP-201ENST00000416781 RNF39Q9H2S5 420 aa14.08□□□□□ -0.16
TTC39DP-201ENST00000416781 DNAJC5BQ9UF47 199 aa14.03□□□□□ -0.16
TTC39DP-201ENST00000416781 DCAF8L1A6NGE4 600 aa14.01□□□□□ -0.17
TTC39DP-201ENST00000416781 C1QBPQ07021 282 aaKnown RBP13.91□□□□□ -0.18
TTC39DP-201ENST00000416781 CSRNP3Q8WYN3 585 aa13.89□□□□□ -0.19
TTC39DP-201ENST00000416781 ZBTB22O15209 634 aa13.79□□□□□ -0.2
TTC39DP-201ENST00000416781 POTEHQ6S545 545 aa13.77□□□□□ -0.21
TTC39DP-201ENST00000416781 FOXD4L1Q9NU39 408 aa13.74□□□□□ -0.21
TTC39DP-201ENST00000416781 SLC4A2P04920 1241 aa13.64□□□□□ -0.23
TTC39DP-201ENST00000416781 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.5□□□□□ -0.25
TTC39DP-201ENST00000416781 MYCNP04198 464 aaPredicted RBP13.44□□□□□ -0.26
TTC39DP-201ENST00000416781 U3KPZ7 1027 aaPredicted RBP13.28□□□□□ -0.28
TTC39DP-201ENST00000416781 ATXN8OSP0DMR3 200 aa13.21□□□□□ -0.29
TTC39DP-201ENST00000416781 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.21□□□□□ -0.3
TTC39DP-201ENST00000416781 HNRNPUL2Q1KMD3 747 aaKnown RBP13.21□□□□□ -0.3
TTC39DP-201ENST00000416781 SAMD1Q6SPF0 538 aaPredicted RBP13.17□□□□□ -0.3
TTC39DP-201ENST00000416781 APLP2Q06481 763 aa13.02□□□□□ -0.32
TTC39DP-201ENST00000416781 ATF5Q9Y2D1 282 aaPredicted RBP13.02□□□□□ -0.32
TTC39DP-201ENST00000416781 DSG3P32926 999 aa12.85□□□□□ -0.35
TTC39DP-201ENST00000416781 SPINK5Q9NQ38 1064 aaPredicted RBP12.85□□□□□ -0.35
TTC39DP-201ENST00000416781 ZNF219Q9P2Y4 722 aaPredicted RBP12.82□□□□□ -0.36
TTC39DP-201ENST00000416781 CAPN15O75808 1086 aa12.8□□□□□ -0.36
TTC39DP-201ENST00000416781 TRHP20396 242 aaPredicted RBP12.8□□□□□ -0.36
TTC39DP-201ENST00000416781 POLA2Q14181 598 aa12.62□□□□□ -0.39
TTC39DP-201ENST00000416781 ABCB7O75027 752 aa12.58□□□□□ -0.4
TTC39DP-201ENST00000416781 FKBP8Q14318 412 aa12.58□□□□□ -0.4
TTC39DP-201ENST00000416781 FBLN2P98095 1184 aa12.51□□□□□ -0.41
TTC39DP-201ENST00000416781 SP7Q8TDD2 431 aaPredicted RBP12.49□□□□□ -0.41
TTC39DP-201ENST00000416781 MKRN4PQ13434 485 aaPredicted RBP12.48□□□□□ -0.41
TTC39DP-201ENST00000416781 RBM42Q9BTD8 480 aaKnown RBP12.46□□□□□ -0.41
TTC39DP-201ENST00000416781 ZBTB12Q9Y330 459 aaPredicted RBP12.45□□□□□ -0.42
TTC39DP-201ENST00000416781 CHRDL2Q6WN34 429 aa12.44□□□□□ -0.42
TTC39DP-201ENST00000416781 SPDYE4A6NLX3 237 aa12.33□□□□□ -0.44
TTC39DP-201ENST00000416781 OSCARQ8IYS5 282 aa12.21□□□□□ -0.45
TTC39DP-201ENST00000416781 SPDYE2BA6NHP3 402 aa12.13□□□□□ -0.47
TTC39DP-201ENST00000416781 SPDYE6P0CI01 402 aa12.13□□□□□ -0.47
TTC39DP-201ENST00000416781 SPDYE2Q495Y8 402 aa12.13□□□□□ -0.47
TTC39DP-201ENST00000416781 PROM2Q8N271 834 aa12.13□□□□□ -0.47
TTC39DP-201ENST00000416781 ZNF692Q9BU19 519 aaPredicted RBP12.11□□□□□ -0.47
TTC39DP-201ENST00000416781 FBXO3Q9UK99 471 aa12.06□□□□□ -0.48
TTC39DP-201ENST00000416781 SSUH2Q9Y2M2 353 aa12.04□□□□□ -0.48
TTC39DP-201ENST00000416781 HAX1O00165 279 aa11.99□□□□□ -0.49
TTC39DP-201ENST00000416781 PABPN1Q86U42 306 aaKnown RBP eCLIP11.97□□□□□ -0.49
TTC39DP-201ENST00000416781 AKT1S1Q96B36 256 aa11.91□□□□□ -0.5
TTC39DP-201ENST00000416781 VASPP50552 380 aaPredicted RBP11.9□□□□□ -0.5
TTC39DP-201ENST00000416781 PIP4P2Q8N4L2 257 aa11.9□□□□□ -0.5
TTC39DP-201ENST00000416781 AMER1Q5JTC6 1135 aaPredicted RBP11.87□□□□□ -0.51
TTC39DP-201ENST00000416781 RTN4Q9NQC3 1192 aaKnown RBP11.84□□□□□ -0.51
TTC39DP-201ENST00000416781 STAG3Q9UJ98 1225 aa11.81□□□□□ -0.52
TTC39DP-201ENST00000416781 PLSCR2Q9NRY7 297 aa11.75□□□□□ -0.53
TTC39DP-201ENST00000416781 IFNLR1Q8IU57 520 aaPredicted RBP11.73□□□□□ -0.53
TTC39DP-201ENST00000416781 REM2Q8IYK8 340 aaPredicted RBP11.73□□□□□ -0.53
TTC39DP-201ENST00000416781 SPDYE1Q8NFV5 336 aaPredicted RBP11.72□□□□□ -0.53
TTC39DP-201ENST00000416781 FXR2P51116 673 aaKnown RBP eCLIP11.71□□□□□ -0.54
TTC39DP-201ENST00000416781 LHX8Q68G74 356 aa11.7□□□□□ -0.54
TTC39DP-201ENST00000416781 PLCD3Q8N3E9 789 aa11.7□□□□□ -0.54
TTC39DP-201ENST00000416781 MIER1Q8N108 512 aa11.67□□□□□ -0.54
TTC39DP-201ENST00000416781 CLEC11AQ9Y240 323 aa11.67□□□□□ -0.54
TTC39DP-201ENST00000416781 KLHL34Q8N239 644 aa11.65□□□□□ -0.54
TTC39DP-201ENST00000416781 PLEKHG5O94827 1062 aa11.62□□□□□ -0.55
TTC39DP-201ENST00000416781 EVX2Q03828 476 aa11.6□□□□□ -0.55
TTC39DP-201ENST00000416781 PITPNM1O00562 1244 aa11.59□□□□□ -0.55
TTC39DP-201ENST00000416781 PRR29P0C7W0 189 aa11.58□□□□□ -0.56
TTC39DP-201ENST00000416781 SPOCK2Q92563 424 aa11.57□□□□□ -0.56
TTC39DP-201ENST00000416781 ZBTB47Q9UFB7 747 aaPredicted RBP11.55□□□□□ -0.56
TTC39DP-201ENST00000416781 CREBZFQ9NS37 354 aa11.46□□□□□ -0.57
TTC39DP-201ENST00000416781 PKD2Q13563 968 aa11.43□□□□□ -0.58
TTC39DP-201ENST00000416781 GABBR2O75899 941 aa11.41□□□□□ -0.58
TTC39DP-201ENST00000416781 C19orf67A6NJJ6 358 aa11.37□□□□□ -0.59
TTC39DP-201ENST00000416781 MNX1P50219 401 aaPredicted RBP11.36□□□□□ -0.59
TTC39DP-201ENST00000416781 CIZ1Q9ULV3 898 aaPredicted RBP11.36□□□□□ -0.59
TTC39DP-201ENST00000416781 CHADLQ6NUI6 762 aa11.34□□□□□ -0.59
TTC39DP-201ENST00000416781 ECM2O94769 699 aaPredicted RBP11.33□□□□□ -0.6
TTC39DP-201ENST00000416781 NUBP1P53384 320 aa11.33□□□□□ -0.6
TTC39DP-201ENST00000416781 PRKAR2AP13861 404 aaKnown RBP11.32□□□□□ -0.6
TTC39DP-201ENST00000416781 DCAF8L2P0C7V8 631 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms