RNA–Protein interactions for RNA: ENST00000456026.1

LINC01653-201, Transcript of long intergenic non-protein coding RNA 1653, humanhuman

TSL 1 (best) BASIC

Gene LINC01653, Length 1,728 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01653-201ENST00000456026 AEBP2Q6ZN18 517 aaPredicted RBP17.13■□□□□ 0.33
LINC01653-201ENST00000456026 NISCHQ9Y2I1 1504 aa16.99■□□□□ 0.31
LINC01653-201ENST00000456026 CHIC1Q5VXU3 224 aa16.94■□□□□ 0.3
LINC01653-201ENST00000456026 POTEDQ86YR6 584 aa15.35■□□□□ 0.05
LINC01653-201ENST00000456026 PHF23Q9BUL5 403 aaPredicted RBP14.97□□□□□ -0.01
LINC01653-201ENST00000456026 CCDC180Q9P1Z9 1646 aa14.71□□□□□ -0.06
LINC01653-201ENST00000456026 SENP3Q9H4L4 574 aaPredicted RBP14.41□□□□□ -0.1
LINC01653-201ENST00000456026 ZCCHC6Q5VYS8 1495 aaKnown RBP14.32□□□□□ -0.12
LINC01653-201ENST00000456026 SHROOM4Q9ULL8 1493 aa14.06□□□□□ -0.16
LINC01653-201ENST00000456026 DCAF1Q9Y4B6 1507 aa14.01□□□□□ -0.17
LINC01653-201ENST00000456026 DCAF8L2P0C7V8 631 aa13.9□□□□□ -0.18
LINC01653-201ENST00000456026 PLPPR3Q6T4P5 718 aa13.84□□□□□ -0.19
LINC01653-201ENST00000456026 MYO15BQ96JP2 1530 aa13.73□□□□□ -0.21
LINC01653-201ENST00000456026 ABCC9O60706 1549 aa13.7□□□□□ -0.22
LINC01653-201ENST00000456026 SUPT5HO00267 1087 aaKnown RBP13.6□□□□□ -0.23
LINC01653-201ENST00000456026 NACADO15069 1562 aa13.59□□□□□ -0.23
LINC01653-201ENST00000456026 SCRIBQ14160 1630 aa13.59□□□□□ -0.23
LINC01653-201ENST00000456026 RB1CC1Q8TDY2 1594 aa13.43□□□□□ -0.26
LINC01653-201ENST00000456026 FOXD1Q16676 465 aa13.39□□□□□ -0.27
LINC01653-201ENST00000456026 UNC13AQ9UPW8 1703 aa13.36□□□□□ -0.27
LINC01653-201ENST00000456026 RSF1Q96T23 1441 aaPredicted RBP13.28□□□□□ -0.28
LINC01653-201ENST00000456026 CECR2Q9BXF3 1484 aa13.24□□□□□ -0.29
LINC01653-201ENST00000456026 MSH5O43196 834 aa13.23□□□□□ -0.29
LINC01653-201ENST00000456026 MROH2BQ7Z745 1585 aa13.18□□□□□ -0.3
LINC01653-201ENST00000456026 BICRAQ9NZM4 1560 aa13.13□□□□□ -0.31
LINC01653-201ENST00000456026 PPP6R1Q9UPN7 881 aa13.13□□□□□ -0.31
LINC01653-201ENST00000456026 WIZO95785 1651 aa13.12□□□□□ -0.31
LINC01653-201ENST00000456026 ADRA2BP18089 450 aa13.11□□□□□ -0.31
LINC01653-201ENST00000456026 BAZ1AQ9NRL2 1556 aaPredicted RBP13.06□□□□□ -0.32
LINC01653-201ENST00000456026 SMARCA4P51532 1647 aa13.04□□□□□ -0.32
LINC01653-201ENST00000456026 PABPN1Q86U42 306 aaKnown RBP eCLIP12.96□□□□□ -0.33
LINC01653-201ENST00000456026 TOP2AP11388 1531 aaKnown RBP12.91□□□□□ -0.34
LINC01653-201ENST00000456026 EIF4G1Q04637 1599 aaKnown RBP12.88□□□□□ -0.35
LINC01653-201ENST00000456026 PEG3Q9GZU2 1588 aa12.85□□□□□ -0.35
LINC01653-201ENST00000456026 SMARCA2P51531 1590 aa12.84□□□□□ -0.35
LINC01653-201ENST00000456026 CCDC88BA6NC98 1476 aa12.8□□□□□ -0.36
LINC01653-201ENST00000456026 TRIM41Q8WV44 630 aa12.73□□□□□ -0.37
LINC01653-201ENST00000456026 ATAD2BQ9ULI0 1458 aa12.73□□□□□ -0.37
LINC01653-201ENST00000456026 LOC105371045A0A1W2PR82 267 aa12.72□□□□□ -0.37
LINC01653-201ENST00000456026 ABCC8Q09428 1581 aa12.66□□□□□ -0.38
LINC01653-201ENST00000456026 PIAS4Q8N2W9 510 aaPredicted RBP12.65□□□□□ -0.38
LINC01653-201ENST00000456026 BAZ1BQ9UIG0 1483 aaKnown RBP12.64□□□□□ -0.39
LINC01653-201ENST00000456026 HMGXB3Q12766 1538 aa12.56□□□□□ -0.4
LINC01653-201ENST00000456026 FAM9AQ8IZU1 332 aaPredicted RBP12.56□□□□□ -0.4
LINC01653-201ENST00000456026 NCAPD3P42695 1498 aa12.55□□□□□ -0.4
LINC01653-201ENST00000456026 SYNJ1O43426 1573 aa12.48□□□□□ -0.41
LINC01653-201ENST00000456026 WRNQ14191 1432 aaPredicted RBP eCLIP12.45□□□□□ -0.42
LINC01653-201ENST00000456026 SOGA1O94964 1423 aa12.44□□□□□ -0.42
LINC01653-201ENST00000456026 RUSC2Q8N2Y8 1516 aa12.43□□□□□ -0.42
LINC01653-201ENST00000456026 CC2D2AQ9P2K1 1620 aa12.42□□□□□ -0.42
LINC01653-201ENST00000456026 EHMT2Q96KQ7 1210 aa12.4□□□□□ -0.42
LINC01653-201ENST00000456026 PRDM2Q13029 1718 aa12.4□□□□□ -0.42
LINC01653-201ENST00000456026 BIVM-ERCC5R4GMW8 1640 aa12.38□□□□□ -0.43
LINC01653-201ENST00000456026 TOP2BQ02880 1626 aa12.37□□□□□ -0.43
LINC01653-201ENST00000456026 CFTRP13569 1480 aa12.36□□□□□ -0.43
LINC01653-201ENST00000456026 EEA1Q15075 1411 aa12.34□□□□□ -0.43
LINC01653-201ENST00000456026 PCGF6Q9BYE7 350 aa12.34□□□□□ -0.43
LINC01653-201ENST00000456026 CUX1P39880 1505 aa12.3□□□□□ -0.44
LINC01653-201ENST00000456026 KCNA4P22459 653 aa12.3□□□□□ -0.44
LINC01653-201ENST00000456026 CSRNP3Q8WYN3 585 aa12.29□□□□□ -0.44
LINC01653-201ENST00000456026 KIF21BO75037 1637 aa12.27□□□□□ -0.45
LINC01653-201ENST00000456026 PPP4R3CPQ6ZMV5 832 aa12.25□□□□□ -0.45
LINC01653-201ENST00000456026 TNIKQ9UKE5 1360 aa12.24□□□□□ -0.45
LINC01653-201ENST00000456026 CACNB1Q02641 598 aaPredicted RBP12.24□□□□□ -0.45
LINC01653-201ENST00000456026 CADPSQ9ULU8 1353 aa12.23□□□□□ -0.45
LINC01653-201ENST00000456026 GOLGA3Q08378 1498 aa12.23□□□□□ -0.45
LINC01653-201ENST00000456026 TRIM26Q12899 539 aaPredicted RBP12.23□□□□□ -0.45
LINC01653-201ENST00000456026 CEP162Q5TB80 1403 aa12.22□□□□□ -0.45
LINC01653-201ENST00000456026 CEP164Q9UPV0 1460 aa12.2□□□□□ -0.46
LINC01653-201ENST00000456026 HRCP23327 699 aa12.17□□□□□ -0.46
LINC01653-201ENST00000456026 RAPGEF2Q9Y4G8 1499 aa12.16□□□□□ -0.46
LINC01653-201ENST00000456026 NESP48681 1621 aa12.15□□□□□ -0.46
LINC01653-201ENST00000456026 UBTFP17480 764 aaKnown RBP12.14□□□□□ -0.47
LINC01653-201ENST00000456026 DNAJC5BQ9UF47 199 aa12.13□□□□□ -0.47
LINC01653-201ENST00000456026 PRXQ9BXM0 1461 aa12.12□□□□□ -0.47
LINC01653-201ENST00000456026 FANCD2Q9BXW9 1451 aa12.12□□□□□ -0.47
LINC01653-201ENST00000456026 ERICH3Q5RHP9 1530 aa12.11□□□□□ -0.47
LINC01653-201ENST00000456026 PPARGC1BQ86YN6 1023 aaKnown RBP12.1□□□□□ -0.47
LINC01653-201ENST00000456026 FGD5Q6ZNL6 1462 aa12.09□□□□□ -0.47
LINC01653-201ENST00000456026 LAMC3Q9Y6N6 1575 aa12.09□□□□□ -0.47
LINC01653-201ENST00000456026 KIF27Q86VH2 1401 aa12.08□□□□□ -0.48
LINC01653-201ENST00000456026 DNMBPQ6XZF7 1577 aa12.07□□□□□ -0.48
LINC01653-201ENST00000456026 CLIP1P30622 1438 aa12.05□□□□□ -0.48
LINC01653-201ENST00000456026 KIF21AQ7Z4S6 1674 aa12.05□□□□□ -0.48
LINC01653-201ENST00000456026 TOPBP1Q92547 1522 aa12.04□□□□□ -0.48
LINC01653-201ENST00000456026 CUX2O14529 1486 aa12.04□□□□□ -0.48
LINC01653-201ENST00000456026 URB2Q14146 1524 aaKnown RBP12.01□□□□□ -0.49
LINC01653-201ENST00000456026 WDR97A6NE52 1622 aa12.01□□□□□ -0.49
LINC01653-201ENST00000456026 IGF1RP08069 1367 aa12.01□□□□□ -0.49
LINC01653-201ENST00000456026 POLA1P09884 1462 aaPredicted RBP12.01□□□□□ -0.49
LINC01653-201ENST00000456026 RAD54L2Q9Y4B4 1467 aa11.99□□□□□ -0.49
LINC01653-201ENST00000456026 VPS8Q8N3P4 1428 aa11.98□□□□□ -0.49
LINC01653-201ENST00000456026 ABCA10Q8WWZ4 1543 aa11.98□□□□□ -0.49
LINC01653-201ENST00000456026 ARAP1Q96P48 1450 aa11.97□□□□□ -0.49
LINC01653-201ENST00000456026 NCBP3Q53F19 620 aaKnown RBP11.96□□□□□ -0.49
LINC01653-201ENST00000456026 PDS5BQ9NTI5 1447 aa11.93□□□□□ -0.5
LINC01653-201ENST00000456026 TTBK1Q5TCY1 1321 aaPredicted RBP11.93□□□□□ -0.5
LINC01653-201ENST00000456026 RANGAP1P46060 587 aaPredicted RBP11.92□□□□□ -0.5
LINC01653-201ENST00000456026 CARMIL1Q5VZK9 1371 aa11.92□□□□□ -0.5
LINC01653-201ENST00000456026 SCAF1Q9H7N4 1312 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms