RNA–Protein interactions for RNA: ENST00000555364.5

LINC01580-202, Transcript of long intergenic non-protein coding RNA 1580, humanhuman

TSL 1 (best) BASIC

Gene LINC01580, Length 661 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01580-202ENST00000555364 AEBP2Q6ZN18 517 aaPredicted RBP23.32■■□□□ 1.32
LINC01580-202ENST00000555364 CHIC1Q5VXU3 224 aa21.72■■□□□ 1.07
LINC01580-202ENST00000555364 SENP3Q9H4L4 574 aaPredicted RBP19.92■□□□□ 0.78
LINC01580-202ENST00000555364 PHF23Q9BUL5 403 aaPredicted RBP19.62■□□□□ 0.73
LINC01580-202ENST00000555364 FOXD1Q16676 465 aa18.65■□□□□ 0.58
LINC01580-202ENST00000555364 POTEDQ86YR6 584 aa18.01■□□□□ 0.47
LINC01580-202ENST00000555364 MSH5O43196 834 aa17.6■□□□□ 0.41
LINC01580-202ENST00000555364 PIAS4Q8N2W9 510 aaPredicted RBP17.28■□□□□ 0.36
LINC01580-202ENST00000555364 PLPPR3Q6T4P5 718 aa17.23■□□□□ 0.35
LINC01580-202ENST00000555364 PPP6R1Q9UPN7 881 aa17.11■□□□□ 0.33
LINC01580-202ENST00000555364 ADRA2BP18089 450 aa17■□□□□ 0.31
LINC01580-202ENST00000555364 MAPK8IP2Q13387 824 aaPredicted RBP15.77■□□□□ 0.12
LINC01580-202ENST00000555364 DMRT2Q9Y5R5 561 aa15.74■□□□□ 0.11
LINC01580-202ENST00000555364 SCAF1Q9H7N4 1312 aaKnown RBP15.51■□□□□ 0.07
LINC01580-202ENST00000555364 CACNB1Q02641 598 aaPredicted RBP15.39■□□□□ 0.05
LINC01580-202ENST00000555364 PPP4R3CPQ6ZMV5 832 aa15.12■□□□□ 0.01
LINC01580-202ENST00000555364 NISCHQ9Y2I1 1504 aa15.09■□□□□ 0.01
LINC01580-202ENST00000555364 DCAF8L1A6NGE4 600 aa15.08■□□□□ 0
LINC01580-202ENST00000555364 RNF39Q9H2S5 420 aa15.01□□□□□ -0.01
LINC01580-202ENST00000555364 HOXD11P31277 338 aaPredicted RBP14.98□□□□□ -0.01
LINC01580-202ENST00000555364 CNKSR2Q8WXI2 1034 aa14.8□□□□□ -0.04
LINC01580-202ENST00000555364 C1QBPQ07021 282 aaKnown RBP14.74□□□□□ -0.05
LINC01580-202ENST00000555364 RNF216Q9NWF9 866 aaPredicted RBP14.73□□□□□ -0.05
LINC01580-202ENST00000555364 NCBP3Q53F19 620 aaKnown RBP14.63□□□□□ -0.07
LINC01580-202ENST00000555364 DNAJC5BQ9UF47 199 aa14.55□□□□□ -0.08
LINC01580-202ENST00000555364 NPM3O75607 178 aaKnown RBP14.36□□□□□ -0.11
LINC01580-202ENST00000555364 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.24□□□□□ -0.13
LINC01580-202ENST00000555364 KCNA4P22459 653 aa14.23□□□□□ -0.13
LINC01580-202ENST00000555364 POTEHQ6S545 545 aa14.01□□□□□ -0.17
LINC01580-202ENST00000555364 U3KPZ7 1027 aaPredicted RBP13.92□□□□□ -0.18
LINC01580-202ENST00000555364 DSG3P32926 999 aa13.89□□□□□ -0.19
LINC01580-202ENST00000555364 SPINK5Q9NQ38 1064 aaPredicted RBP13.87□□□□□ -0.19
LINC01580-202ENST00000555364 CAPN15O75808 1086 aa13.83□□□□□ -0.2
LINC01580-202ENST00000555364 SLC4A2P04920 1241 aa13.65□□□□□ -0.22
LINC01580-202ENST00000555364 APLP2Q06481 763 aa13.52□□□□□ -0.25
LINC01580-202ENST00000555364 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.5□□□□□ -0.25
LINC01580-202ENST00000555364 TRHP20396 242 aaPredicted RBP13.5□□□□□ -0.25
LINC01580-202ENST00000555364 HNRNPUL2Q1KMD3 747 aaKnown RBP13.5□□□□□ -0.25
LINC01580-202ENST00000555364 SLC4A1APQ9BWU0 796 aaKnown RBP13.49□□□□□ -0.25
LINC01580-202ENST00000555364 ABCB7O75027 752 aa13.48□□□□□ -0.25
LINC01580-202ENST00000555364 CCDC180Q9P1Z9 1646 aa13.45□□□□□ -0.26
LINC01580-202ENST00000555364 ZNF219Q9P2Y4 722 aaPredicted RBP13.44□□□□□ -0.26
LINC01580-202ENST00000555364 SAMD1Q6SPF0 538 aaPredicted RBP13.39□□□□□ -0.27
LINC01580-202ENST00000555364 MYCNP04198 464 aaPredicted RBP13.3□□□□□ -0.28
LINC01580-202ENST00000555364 FOXD4L1Q9NU39 408 aa13.25□□□□□ -0.29
LINC01580-202ENST00000555364 RBM42Q9BTD8 480 aaKnown RBP13.23□□□□□ -0.29
LINC01580-202ENST00000555364 ABCC9O60706 1549 aa13.21□□□□□ -0.29
LINC01580-202ENST00000555364 CHRDL2Q6WN34 429 aa13.16□□□□□ -0.3
LINC01580-202ENST00000555364 ZBTB22O15209 634 aa13.05□□□□□ -0.32
LINC01580-202ENST00000555364 POLA2Q14181 598 aa13.05□□□□□ -0.32
LINC01580-202ENST00000555364 ATF5Q9Y2D1 282 aaPredicted RBP12.94□□□□□ -0.34
LINC01580-202ENST00000555364 SP7Q8TDD2 431 aaPredicted RBP12.91□□□□□ -0.34
LINC01580-202ENST00000555364 AKT1S1Q96B36 256 aa12.84□□□□□ -0.35
LINC01580-202ENST00000555364 ATXN8OSP0DMR3 200 aa12.83□□□□□ -0.36
LINC01580-202ENST00000555364 ZBTB12Q9Y330 459 aaPredicted RBP12.82□□□□□ -0.36
LINC01580-202ENST00000555364 PIP4P2Q8N4L2 257 aa12.75□□□□□ -0.37
LINC01580-202ENST00000555364 REM2Q8IYK8 340 aaPredicted RBP12.74□□□□□ -0.37
LINC01580-202ENST00000555364 RB1CC1Q8TDY2 1594 aa12.65□□□□□ -0.38
LINC01580-202ENST00000555364 OSCARQ8IYS5 282 aa12.64□□□□□ -0.39
LINC01580-202ENST00000555364 NACADO15069 1562 aa12.64□□□□□ -0.39
LINC01580-202ENST00000555364 HAX1O00165 279 aa12.62□□□□□ -0.39
LINC01580-202ENST00000555364 PITPNM1O00562 1244 aa12.61□□□□□ -0.39
LINC01580-202ENST00000555364 FXR2P51116 673 aaKnown RBP eCLIP12.6□□□□□ -0.39
LINC01580-202ENST00000555364 CSRNP3Q8WYN3 585 aa12.6□□□□□ -0.39
LINC01580-202ENST00000555364 EHMT2Q96KQ7 1210 aa12.59□□□□□ -0.39
LINC01580-202ENST00000555364 ZCCHC6Q5VYS8 1495 aaKnown RBP12.59□□□□□ -0.39
LINC01580-202ENST00000555364 MYO15BQ96JP2 1530 aa12.57□□□□□ -0.4
LINC01580-202ENST00000555364 DCAF8L2P0C7V8 631 aa12.53□□□□□ -0.4
LINC01580-202ENST00000555364 FBLN2P98095 1184 aa12.51□□□□□ -0.41
LINC01580-202ENST00000555364 DCAF1Q9Y4B6 1507 aa12.51□□□□□ -0.41
LINC01580-202ENST00000555364 EVX2Q03828 476 aa12.48□□□□□ -0.41
LINC01580-202ENST00000555364 SPDYE2BA6NHP3 402 aa12.37□□□□□ -0.43
LINC01580-202ENST00000555364 SPDYE6P0CI01 402 aa12.37□□□□□ -0.43
LINC01580-202ENST00000555364 SPDYE2Q495Y8 402 aa12.37□□□□□ -0.43
LINC01580-202ENST00000555364 UNC13AQ9UPW8 1703 aa12.37□□□□□ -0.43
LINC01580-202ENST00000555364 MKRN4PQ13434 485 aaPredicted RBP12.35□□□□□ -0.43
LINC01580-202ENST00000555364 BICRAQ9NZM4 1560 aa12.26□□□□□ -0.45
LINC01580-202ENST00000555364 PRKAR2AP13861 404 aaKnown RBP12.26□□□□□ -0.45
LINC01580-202ENST00000555364 SCRIBQ14160 1630 aa12.24□□□□□ -0.45
LINC01580-202ENST00000555364 PABPN1Q86U42 306 aaKnown RBP eCLIP12.24□□□□□ -0.45
LINC01580-202ENST00000555364 ZNF692Q9BU19 519 aaPredicted RBP12.23□□□□□ -0.45
LINC01580-202ENST00000555364 C19orf67A6NJJ6 358 aa12.21□□□□□ -0.45
LINC01580-202ENST00000555364 SPDYE1Q8NFV5 336 aaPredicted RBP12.19□□□□□ -0.46
LINC01580-202ENST00000555364 CLEC11AQ9Y240 323 aa12.19□□□□□ -0.46
LINC01580-202ENST00000555364 SHROOM4Q9ULL8 1493 aa12.17□□□□□ -0.46
LINC01580-202ENST00000555364 GABBR2O75899 941 aa12.15□□□□□ -0.46
LINC01580-202ENST00000555364 SSUH2Q9Y2M2 353 aa12.15□□□□□ -0.46
LINC01580-202ENST00000555364 LHX8Q68G74 356 aa12.11□□□□□ -0.47
LINC01580-202ENST00000555364 DNAJC5Q9H3Z4 198 aa12.09□□□□□ -0.47
LINC01580-202ENST00000555364 CHADLQ6NUI6 762 aa12.03□□□□□ -0.48
LINC01580-202ENST00000555364 CECR2Q9BXF3 1484 aa11.95□□□□□ -0.5
LINC01580-202ENST00000555364 EIF4G1Q04637 1599 aaKnown RBP11.94□□□□□ -0.5
LINC01580-202ENST00000555364 PRR29P0C7W0 189 aa11.93□□□□□ -0.5
LINC01580-202ENST00000555364 POTEIP0CG38 1075 aa11.91□□□□□ -0.5
LINC01580-202ENST00000555364 SPDYE4A6NLX3 237 aa11.9□□□□□ -0.5
LINC01580-202ENST00000555364 CC2D2AQ9P2K1 1620 aa11.89□□□□□ -0.51
LINC01580-202ENST00000555364 CD44P16070 742 aaKnown RBP11.84□□□□□ -0.51
LINC01580-202ENST00000555364 FARP1Q9Y4F1 1045 aaPredicted RBP11.81□□□□□ -0.52
LINC01580-202ENST00000555364 STAG3Q9UJ98 1225 aa11.8□□□□□ -0.52
LINC01580-202ENST00000555364 CLCN6P51797 869 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms