RNA–Protein interactions for RNA: ENST00000596480.5

SSX2B-202, Transcript of SSX family member 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2B, Length 1,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2B-202ENST00000596480 AEBP2Q6ZN18 517 aaPredicted RBP19.13■□□□□ 0.65
SSX2B-202ENST00000596480 CHIC1Q5VXU3 224 aa18.46■□□□□ 0.55
SSX2B-202ENST00000596480 NISCHQ9Y2I1 1504 aa16.87■□□□□ 0.29
SSX2B-202ENST00000596480 SENP3Q9H4L4 574 aaPredicted RBP16.28■□□□□ 0.2
SSX2B-202ENST00000596480 PHF23Q9BUL5 403 aaPredicted RBP16.2■□□□□ 0.18
SSX2B-202ENST00000596480 FOXD1Q16676 465 aa15.11■□□□□ 0.01
SSX2B-202ENST00000596480 PLPPR3Q6T4P5 718 aa14.87□□□□□ -0.03
SSX2B-202ENST00000596480 CCDC180Q9P1Z9 1646 aa14.74□□□□□ -0.05
SSX2B-202ENST00000596480 PPP6R1Q9UPN7 881 aa14.34□□□□□ -0.11
SSX2B-202ENST00000596480 ADRA2BP18089 450 aa14.28□□□□□ -0.12
SSX2B-202ENST00000596480 ZCCHC6Q5VYS8 1495 aaKnown RBP14.22□□□□□ -0.13
SSX2B-202ENST00000596480 PIAS4Q8N2W9 510 aaPredicted RBP14.16□□□□□ -0.14
SSX2B-202ENST00000596480 MSH5O43196 834 aa14.06□□□□□ -0.16
SSX2B-202ENST00000596480 DCAF1Q9Y4B6 1507 aa13.95□□□□□ -0.18
SSX2B-202ENST00000596480 SHROOM4Q9ULL8 1493 aa13.83□□□□□ -0.2
SSX2B-202ENST00000596480 DCAF8L2P0C7V8 631 aa13.79□□□□□ -0.2
SSX2B-202ENST00000596480 ABCC9O60706 1549 aa13.74□□□□□ -0.21
SSX2B-202ENST00000596480 MYO15BQ96JP2 1530 aa13.73□□□□□ -0.21
SSX2B-202ENST00000596480 NACADO15069 1562 aa13.63□□□□□ -0.23
SSX2B-202ENST00000596480 SCRIBQ14160 1630 aa13.56□□□□□ -0.24
SSX2B-202ENST00000596480 RB1CC1Q8TDY2 1594 aa13.5□□□□□ -0.25
SSX2B-202ENST00000596480 UNC13AQ9UPW8 1703 aa13.34□□□□□ -0.27
SSX2B-202ENST00000596480 SUPT5HO00267 1087 aaKnown RBP13.32□□□□□ -0.28
SSX2B-202ENST00000596480 POTEDQ86YR6 584 aa13.2□□□□□ -0.3
SSX2B-202ENST00000596480 RSF1Q96T23 1441 aaPredicted RBP13.11□□□□□ -0.31
SSX2B-202ENST00000596480 BICRAQ9NZM4 1560 aa13.1□□□□□ -0.31
SSX2B-202ENST00000596480 SCAF1Q9H7N4 1312 aaKnown RBP13.1□□□□□ -0.31
SSX2B-202ENST00000596480 CECR2Q9BXF3 1484 aa13.09□□□□□ -0.31
SSX2B-202ENST00000596480 MROH2BQ7Z745 1585 aa13.05□□□□□ -0.32
SSX2B-202ENST00000596480 PPP4R3CPQ6ZMV5 832 aa13.04□□□□□ -0.32
SSX2B-202ENST00000596480 BAZ1AQ9NRL2 1556 aaPredicted RBP13.03□□□□□ -0.32
SSX2B-202ENST00000596480 MAPK8IP2Q13387 824 aaPredicted RBP13.02□□□□□ -0.33
SSX2B-202ENST00000596480 WIZO95785 1651 aa12.99□□□□□ -0.33
SSX2B-202ENST00000596480 SMARCA4P51532 1647 aa12.99□□□□□ -0.33
SSX2B-202ENST00000596480 DMRT2Q9Y5R5 561 aa12.97□□□□□ -0.33
SSX2B-202ENST00000596480 PABPN1Q86U42 306 aaKnown RBP eCLIP12.92□□□□□ -0.34
SSX2B-202ENST00000596480 TOP2AP11388 1531 aaKnown RBP12.85□□□□□ -0.35
SSX2B-202ENST00000596480 PEG3Q9GZU2 1588 aa12.8□□□□□ -0.36
SSX2B-202ENST00000596480 CNKSR2Q8WXI2 1034 aa12.76□□□□□ -0.37
SSX2B-202ENST00000596480 SMARCA2P51531 1590 aa12.73□□□□□ -0.37
SSX2B-202ENST00000596480 EIF4G1Q04637 1599 aaKnown RBP12.73□□□□□ -0.37
SSX2B-202ENST00000596480 ATAD2BQ9ULI0 1458 aa12.68□□□□□ -0.38
SSX2B-202ENST00000596480 CCDC88BA6NC98 1476 aa12.66□□□□□ -0.38
SSX2B-202ENST00000596480 BAZ1BQ9UIG0 1483 aaKnown RBP12.64□□□□□ -0.39
SSX2B-202ENST00000596480 HOXD11P31277 338 aaPredicted RBP12.63□□□□□ -0.39
SSX2B-202ENST00000596480 NCBP3Q53F19 620 aaKnown RBP12.63□□□□□ -0.39
SSX2B-202ENST00000596480 HMGXB3Q12766 1538 aa12.6□□□□□ -0.39
SSX2B-202ENST00000596480 RNF216Q9NWF9 866 aaPredicted RBP12.59□□□□□ -0.39
SSX2B-202ENST00000596480 NCAPD3P42695 1498 aa12.53□□□□□ -0.4
SSX2B-202ENST00000596480 TRIM41Q8WV44 630 aa12.5□□□□□ -0.41
SSX2B-202ENST00000596480 ABCC8Q09428 1581 aa12.5□□□□□ -0.41
SSX2B-202ENST00000596480 CC2D2AQ9P2K1 1620 aa12.48□□□□□ -0.41
SSX2B-202ENST00000596480 KCNA4P22459 653 aa12.47□□□□□ -0.41
SSX2B-202ENST00000596480 NPM3O75607 178 aaKnown RBP12.46□□□□□ -0.41
SSX2B-202ENST00000596480 PRDM2Q13029 1718 aa12.42□□□□□ -0.42
SSX2B-202ENST00000596480 SYNJ1O43426 1573 aa12.35□□□□□ -0.43
SSX2B-202ENST00000596480 WRNQ14191 1432 aaPredicted RBP eCLIP12.35□□□□□ -0.43
SSX2B-202ENST00000596480 LOC105371045A0A1W2PR82 267 aa12.32□□□□□ -0.44
SSX2B-202ENST00000596480 BIVM-ERCC5R4GMW8 1640 aa12.3□□□□□ -0.44
SSX2B-202ENST00000596480 CFTRP13569 1480 aa12.3□□□□□ -0.44
SSX2B-202ENST00000596480 FAM9AQ8IZU1 332 aaPredicted RBP12.3□□□□□ -0.44
SSX2B-202ENST00000596480 DNAJC5BQ9UF47 199 aa12.3□□□□□ -0.44
SSX2B-202ENST00000596480 TOP2BQ02880 1626 aa12.29□□□□□ -0.44
SSX2B-202ENST00000596480 DCAF8L1A6NGE4 600 aa12.26□□□□□ -0.45
SSX2B-202ENST00000596480 EEA1Q15075 1411 aa12.24□□□□□ -0.45
SSX2B-202ENST00000596480 SOGA1O94964 1423 aa12.22□□□□□ -0.45
SSX2B-202ENST00000596480 CUX1P39880 1505 aa12.21□□□□□ -0.46
SSX2B-202ENST00000596480 CADPSQ9ULU8 1353 aa12.2□□□□□ -0.46
SSX2B-202ENST00000596480 RUSC2Q8N2Y8 1516 aa12.18□□□□□ -0.46
SSX2B-202ENST00000596480 LAMC3Q9Y6N6 1575 aa12.15□□□□□ -0.46
SSX2B-202ENST00000596480 KIF21BO75037 1637 aa12.15□□□□□ -0.47
SSX2B-202ENST00000596480 EHMT2Q96KQ7 1210 aa12.13□□□□□ -0.47
SSX2B-202ENST00000596480 FANCD2Q9BXW9 1451 aa12.12□□□□□ -0.47
SSX2B-202ENST00000596480 NESP48681 1621 aa12.11□□□□□ -0.47
SSX2B-202ENST00000596480 GOLGA3Q08378 1498 aa12.1□□□□□ -0.47
SSX2B-202ENST00000596480 CSRNP3Q8WYN3 585 aa12.09□□□□□ -0.47
SSX2B-202ENST00000596480 CEP164Q9UPV0 1460 aa12.08□□□□□ -0.47
SSX2B-202ENST00000596480 DNMBPQ6XZF7 1577 aa12.08□□□□□ -0.48
SSX2B-202ENST00000596480 KIF21AQ7Z4S6 1674 aa12.06□□□□□ -0.48
SSX2B-202ENST00000596480 TNIKQ9UKE5 1360 aa12.05□□□□□ -0.48
SSX2B-202ENST00000596480 FGD5Q6ZNL6 1462 aa12.04□□□□□ -0.48
SSX2B-202ENST00000596480 RNF39Q9H2S5 420 aa12.03□□□□□ -0.48
SSX2B-202ENST00000596480 CEP162Q5TB80 1403 aa12.02□□□□□ -0.49
SSX2B-202ENST00000596480 ERICH3Q5RHP9 1530 aa12.01□□□□□ -0.49
SSX2B-202ENST00000596480 TOPBP1Q92547 1522 aa12.01□□□□□ -0.49
SSX2B-202ENST00000596480 KIF27Q86VH2 1401 aa12.01□□□□□ -0.49
SSX2B-202ENST00000596480 PDS5BQ9NTI5 1447 aa11.99□□□□□ -0.49
SSX2B-202ENST00000596480 RAPGEF2Q9Y4G8 1499 aa11.99□□□□□ -0.49
SSX2B-202ENST00000596480 WDR97A6NE52 1622 aa11.99□□□□□ -0.49
SSX2B-202ENST00000596480 URB2Q14146 1524 aaKnown RBP11.97□□□□□ -0.49
SSX2B-202ENST00000596480 CUX2O14529 1486 aa11.97□□□□□ -0.49
SSX2B-202ENST00000596480 PRXQ9BXM0 1461 aa11.97□□□□□ -0.49
SSX2B-202ENST00000596480 UBTFP17480 764 aaKnown RBP11.96□□□□□ -0.49
SSX2B-202ENST00000596480 POLA1P09884 1462 aaPredicted RBP11.95□□□□□ -0.5
SSX2B-202ENST00000596480 ABCA10Q8WWZ4 1543 aa11.93□□□□□ -0.5
SSX2B-202ENST00000596480 RAD54L2Q9Y4B4 1467 aa11.91□□□□□ -0.5
SSX2B-202ENST00000596480 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.91□□□□□ -0.5
SSX2B-202ENST00000596480 PCGF6Q9BYE7 350 aa11.9□□□□□ -0.5
SSX2B-202ENST00000596480 CUL7Q14999 1698 aa11.89□□□□□ -0.51
SSX2B-202ENST00000596480 CLIP1P30622 1438 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms