RNA–Protein interactions for RNA: ENST00000413406.1

AC004014.1-201, humanhuman

TSL 4 BASIC

Gene AC004014.1, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004014.1-201ENST00000413406 AEBP2Q6ZN18 517 aaPredicted RBP24.81■■□□□ 1.56
AC004014.1-201ENST00000413406 CHIC1Q5VXU3 224 aa23.72■■□□□ 1.39
AC004014.1-201ENST00000413406 SENP3Q9H4L4 574 aaPredicted RBP21.13■□□□□ 0.97
AC004014.1-201ENST00000413406 PHF23Q9BUL5 403 aaPredicted RBP20.9■□□□□ 0.94
AC004014.1-201ENST00000413406 FOXD1Q16676 465 aa19.69■□□□□ 0.74
AC004014.1-201ENST00000413406 PLPPR3Q6T4P5 718 aa19.05■□□□□ 0.64
AC004014.1-201ENST00000413406 PPP6R1Q9UPN7 881 aa18.55■□□□□ 0.56
AC004014.1-201ENST00000413406 ADRA2BP18089 450 aa18.52■□□□□ 0.56
AC004014.1-201ENST00000413406 PIAS4Q8N2W9 510 aaPredicted RBP18.46■□□□□ 0.55
AC004014.1-201ENST00000413406 MSH5O43196 834 aa18.34■□□□□ 0.53
AC004014.1-201ENST00000413406 POTEDQ86YR6 584 aa17.61■□□□□ 0.41
AC004014.1-201ENST00000413406 MAPK8IP2Q13387 824 aaPredicted RBP16.96■□□□□ 0.31
AC004014.1-201ENST00000413406 SCAF1Q9H7N4 1312 aaKnown RBP16.94■□□□□ 0.3
AC004014.1-201ENST00000413406 DMRT2Q9Y5R5 561 aa16.78■□□□□ 0.28
AC004014.1-201ENST00000413406 PPP4R3CPQ6ZMV5 832 aa16.73■□□□□ 0.27
AC004014.1-201ENST00000413406 CNKSR2Q8WXI2 1034 aa16.36■□□□□ 0.21
AC004014.1-201ENST00000413406 HOXD11P31277 338 aaPredicted RBP16.22■□□□□ 0.19
AC004014.1-201ENST00000413406 RNF216Q9NWF9 866 aaPredicted RBP16.16■□□□□ 0.18
AC004014.1-201ENST00000413406 DCAF8L1A6NGE4 600 aa16.15■□□□□ 0.18
AC004014.1-201ENST00000413406 NCBP3Q53F19 620 aaKnown RBP16.14■□□□□ 0.17
AC004014.1-201ENST00000413406 NPM3O75607 178 aaKnown RBP15.91■□□□□ 0.14
AC004014.1-201ENST00000413406 KCNA4P22459 653 aa15.77■□□□□ 0.12
AC004014.1-201ENST00000413406 RNF39Q9H2S5 420 aa15.67■□□□□ 0.1
AC004014.1-201ENST00000413406 CACNB1Q02641 598 aaPredicted RBP15.66■□□□□ 0.1
AC004014.1-201ENST00000413406 DNAJC5BQ9UF47 199 aa15.59■□□□□ 0.09
AC004014.1-201ENST00000413406 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.51■□□□□ 0.07
AC004014.1-201ENST00000413406 C1QBPQ07021 282 aaKnown RBP15.44■□□□□ 0.06
AC004014.1-201ENST00000413406 U3KPZ7 1027 aaPredicted RBP15.18■□□□□ 0.02
AC004014.1-201ENST00000413406 SLC4A2P04920 1241 aa15.14■□□□□ 0.01
AC004014.1-201ENST00000413406 SLC4A1APQ9BWU0 796 aaKnown RBP14.93□□□□□ -0.02
AC004014.1-201ENST00000413406 SPINK5Q9NQ38 1064 aaPredicted RBP14.93□□□□□ -0.02
AC004014.1-201ENST00000413406 CAPN15O75808 1086 aa14.91□□□□□ -0.02
AC004014.1-201ENST00000413406 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.8□□□□□ -0.04
AC004014.1-201ENST00000413406 HNRNPUL2Q1KMD3 747 aaKnown RBP14.8□□□□□ -0.04
AC004014.1-201ENST00000413406 APLP2Q06481 763 aa14.77□□□□□ -0.05
AC004014.1-201ENST00000413406 DSG3P32926 999 aa14.74□□□□□ -0.05
AC004014.1-201ENST00000413406 SAMD1Q6SPF0 538 aaPredicted RBP14.73□□□□□ -0.05
AC004014.1-201ENST00000413406 TRHP20396 242 aaPredicted RBP14.71□□□□□ -0.05
AC004014.1-201ENST00000413406 MYCNP04198 464 aaPredicted RBP14.7□□□□□ -0.06
AC004014.1-201ENST00000413406 ZNF219Q9P2Y4 722 aaPredicted RBP14.66□□□□□ -0.06
AC004014.1-201ENST00000413406 FOXD4L1Q9NU39 408 aa14.65□□□□□ -0.06
AC004014.1-201ENST00000413406 ABCB7O75027 752 aa14.58□□□□□ -0.08
AC004014.1-201ENST00000413406 ZBTB22O15209 634 aa14.5□□□□□ -0.09
AC004014.1-201ENST00000413406 ATF5Q9Y2D1 282 aaPredicted RBP14.37□□□□□ -0.11
AC004014.1-201ENST00000413406 POLA2Q14181 598 aa14.35□□□□□ -0.11
AC004014.1-201ENST00000413406 ATXN8OSP0DMR3 200 aa14.16□□□□□ -0.14
AC004014.1-201ENST00000413406 RBM42Q9BTD8 480 aaKnown RBP14.05□□□□□ -0.16
AC004014.1-201ENST00000413406 ZBTB12Q9Y330 459 aaPredicted RBP14.04□□□□□ -0.16
AC004014.1-201ENST00000413406 CSRNP3Q8WYN3 585 aa13.99□□□□□ -0.17
AC004014.1-201ENST00000413406 EHMT2Q96KQ7 1210 aa13.96□□□□□ -0.17
AC004014.1-201ENST00000413406 OSCARQ8IYS5 282 aa13.88□□□□□ -0.19
AC004014.1-201ENST00000413406 POTEHQ6S545 545 aa13.84□□□□□ -0.19
AC004014.1-201ENST00000413406 FBLN2P98095 1184 aa13.79□□□□□ -0.2
AC004014.1-201ENST00000413406 AKT1S1Q96B36 256 aa13.77□□□□□ -0.21
AC004014.1-201ENST00000413406 MKRN4PQ13434 485 aaPredicted RBP13.7□□□□□ -0.22
AC004014.1-201ENST00000413406 CHRDL2Q6WN34 429 aa13.69□□□□□ -0.22
AC004014.1-201ENST00000413406 REM2Q8IYK8 340 aaPredicted RBP13.65□□□□□ -0.22
AC004014.1-201ENST00000413406 SPDYE2BA6NHP3 402 aa13.62□□□□□ -0.23
AC004014.1-201ENST00000413406 SPDYE6P0CI01 402 aa13.62□□□□□ -0.23
AC004014.1-201ENST00000413406 SPDYE2Q495Y8 402 aa13.62□□□□□ -0.23
AC004014.1-201ENST00000413406 ZNF692Q9BU19 519 aaPredicted RBP13.52□□□□□ -0.25
AC004014.1-201ENST00000413406 PITPNM1O00562 1244 aa13.51□□□□□ -0.25
AC004014.1-201ENST00000413406 SSUH2Q9Y2M2 353 aa13.45□□□□□ -0.26
AC004014.1-201ENST00000413406 PIP4P2Q8N4L2 257 aa13.4□□□□□ -0.26
AC004014.1-201ENST00000413406 CLEC11AQ9Y240 323 aa13.36□□□□□ -0.27
AC004014.1-201ENST00000413406 SPDYE1Q8NFV5 336 aaPredicted RBP13.34□□□□□ -0.27
AC004014.1-201ENST00000413406 FXR2P51116 673 aaKnown RBP eCLIP13.33□□□□□ -0.28
AC004014.1-201ENST00000413406 PABPN1Q86U42 306 aaKnown RBP eCLIP13.32□□□□□ -0.28
AC004014.1-201ENST00000413406 PRKAR2AP13861 404 aaKnown RBP13.17□□□□□ -0.3
AC004014.1-201ENST00000413406 SPDYE4A6NLX3 237 aa13.16□□□□□ -0.3
AC004014.1-201ENST00000413406 HAX1O00165 279 aa13.14□□□□□ -0.31
AC004014.1-201ENST00000413406 PRR29P0C7W0 189 aa13.14□□□□□ -0.31
AC004014.1-201ENST00000413406 CHADLQ6NUI6 762 aa13.08□□□□□ -0.32
AC004014.1-201ENST00000413406 SP7Q8TDD2 431 aaPredicted RBP13.05□□□□□ -0.32
AC004014.1-201ENST00000413406 EVX2Q03828 476 aa12.97□□□□□ -0.33
AC004014.1-201ENST00000413406 STAG3Q9UJ98 1225 aa12.97□□□□□ -0.33
AC004014.1-201ENST00000413406 C19orf67A6NJJ6 358 aa12.9□□□□□ -0.34
AC004014.1-201ENST00000413406 FARP1Q9Y4F1 1045 aaPredicted RBP12.88□□□□□ -0.35
AC004014.1-201ENST00000413406 CREBZFQ9NS37 354 aa12.84□□□□□ -0.35
AC004014.1-201ENST00000413406 PROM2Q8N271 834 aa12.83□□□□□ -0.36
AC004014.1-201ENST00000413406 CD44P16070 742 aaKnown RBP12.77□□□□□ -0.37
AC004014.1-201ENST00000413406 FKBP8Q14318 412 aa12.7□□□□□ -0.38
AC004014.1-201ENST00000413406 GABBR2O75899 941 aa12.68□□□□□ -0.38
AC004014.1-201ENST00000413406 MNX1P50219 401 aaPredicted RBP12.63□□□□□ -0.39
AC004014.1-201ENST00000413406 NPM1P06748 294 aaKnown RBP eCLIP12.62□□□□□ -0.39
AC004014.1-201ENST00000413406 ZRANB1Q9UGI0 708 aa12.62□□□□□ -0.39
AC004014.1-201ENST00000413406 MIER1Q8N108 512 aa12.56□□□□□ -0.4
AC004014.1-201ENST00000413406 PAK3O75914 559 aaPredicted RBP12.55□□□□□ -0.4
AC004014.1-201ENST00000413406 ZNF579Q8NAF0 562 aaKnown RBP12.55□□□□□ -0.4
AC004014.1-201ENST00000413406 PLEKHG5O94827 1062 aa12.52□□□□□ -0.41
AC004014.1-201ENST00000413406 CLCN6P51797 869 aa12.51□□□□□ -0.41
AC004014.1-201ENST00000413406 PLCD3Q8N3E9 789 aa12.48□□□□□ -0.41
AC004014.1-201ENST00000413406 PHF12Q96QT6 1004 aa12.46□□□□□ -0.41
AC004014.1-201ENST00000413406 TSPYL2Q9H2G4 693 aaPredicted RBP12.43□□□□□ -0.42
AC004014.1-201ENST00000413406 GALR2O43603 387 aaPredicted RBP12.4□□□□□ -0.42
AC004014.1-201ENST00000413406 POTEIP0CG38 1075 aa12.4□□□□□ -0.42
AC004014.1-201ENST00000413406 DCBLD2Q96PD2 775 aa12.4□□□□□ -0.42
AC004014.1-201ENST00000413406 FBXO3Q9UK99 471 aa12.37□□□□□ -0.43
AC004014.1-201ENST00000413406 ZBTB47Q9UFB7 747 aaPredicted RBP12.35□□□□□ -0.43
AC004014.1-201ENST00000413406 RASEFQ8IZ41 740 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms