RNA–Protein interactions for RNA: ENST00000554186.1

LINC00520-201, long intergenic non-protein coding RNA 520, humanhuman

TSL 5 BASIC

Gene LINC00520, Length 831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-201ENST00000554186 AEBP2Q6ZN18 517 aaPredicted RBP26.81■■□□□ 1.88
LINC00520-201ENST00000554186 CHIC1Q5VXU3 224 aa25.23■■□□□ 1.63
LINC00520-201ENST00000554186 SENP3Q9H4L4 574 aaPredicted RBP22.71■■□□□ 1.23
LINC00520-201ENST00000554186 PHF23Q9BUL5 403 aaPredicted RBP22.47■■□□□ 1.19
LINC00520-201ENST00000554186 POTEDQ86YR6 584 aa22.35■■□□□ 1.17
LINC00520-201ENST00000554186 FOXD1Q16676 465 aa21.3■■□□□ 1
LINC00520-201ENST00000554186 MSH5O43196 834 aa20.17■□□□□ 0.82
LINC00520-201ENST00000554186 PLPPR3Q6T4P5 718 aa20.03■□□□□ 0.8
LINC00520-201ENST00000554186 PPP6R1Q9UPN7 881 aa19.88■□□□□ 0.77
LINC00520-201ENST00000554186 PIAS4Q8N2W9 510 aaPredicted RBP19.82■□□□□ 0.76
LINC00520-201ENST00000554186 ADRA2BP18089 450 aa19.79■□□□□ 0.76
LINC00520-201ENST00000554186 CACNB1Q02641 598 aaPredicted RBP18.27■□□□□ 0.52
LINC00520-201ENST00000554186 MAPK8IP2Q13387 824 aaPredicted RBP18.25■□□□□ 0.51
LINC00520-201ENST00000554186 DMRT2Q9Y5R5 561 aa18.04■□□□□ 0.48
LINC00520-201ENST00000554186 SCAF1Q9H7N4 1312 aaKnown RBP17.89■□□□□ 0.45
LINC00520-201ENST00000554186 PPP4R3CPQ6ZMV5 832 aa17.61■□□□□ 0.41
LINC00520-201ENST00000554186 HOXD11P31277 338 aaPredicted RBP17.32■□□□□ 0.36
LINC00520-201ENST00000554186 DCAF8L1A6NGE4 600 aa17.3■□□□□ 0.36
LINC00520-201ENST00000554186 CNKSR2Q8WXI2 1034 aa17.25■□□□□ 0.35
LINC00520-201ENST00000554186 POTEHQ6S545 545 aa17.19■□□□□ 0.34
LINC00520-201ENST00000554186 RNF39Q9H2S5 420 aa17.13■□□□□ 0.33
LINC00520-201ENST00000554186 RNF216Q9NWF9 866 aaPredicted RBP17.13■□□□□ 0.33
LINC00520-201ENST00000554186 NCBP3Q53F19 620 aaKnown RBP16.78■□□□□ 0.28
LINC00520-201ENST00000554186 C1QBPQ07021 282 aaKnown RBP16.74■□□□□ 0.27
LINC00520-201ENST00000554186 NPM3O75607 178 aaKnown RBP16.69■□□□□ 0.26
LINC00520-201ENST00000554186 DNAJC5BQ9UF47 199 aa16.63■□□□□ 0.25
LINC00520-201ENST00000554186 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.48■□□□□ 0.23
LINC00520-201ENST00000554186 KCNA4P22459 653 aa16.3■□□□□ 0.2
LINC00520-201ENST00000554186 U3KPZ7 1027 aaPredicted RBP16.2■□□□□ 0.18
LINC00520-201ENST00000554186 SPINK5Q9NQ38 1064 aaPredicted RBP16.03■□□□□ 0.16
LINC00520-201ENST00000554186 SLC4A2P04920 1241 aa16.01■□□□□ 0.15
LINC00520-201ENST00000554186 CAPN15O75808 1086 aa15.92■□□□□ 0.14
LINC00520-201ENST00000554186 DSG3P32926 999 aa15.89■□□□□ 0.13
LINC00520-201ENST00000554186 TRHP20396 242 aaPredicted RBP15.66■□□□□ 0.1
LINC00520-201ENST00000554186 ABCB7O75027 752 aa15.62■□□□□ 0.09
LINC00520-201ENST00000554186 ZNF219Q9P2Y4 722 aaPredicted RBP15.53■□□□□ 0.08
LINC00520-201ENST00000554186 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.5■□□□□ 0.07
LINC00520-201ENST00000554186 APLP2Q06481 763 aa15.5■□□□□ 0.07
LINC00520-201ENST00000554186 HNRNPUL2Q1KMD3 747 aaKnown RBP15.5■□□□□ 0.07
LINC00520-201ENST00000554186 SAMD1Q6SPF0 538 aaPredicted RBP15.46■□□□□ 0.07
LINC00520-201ENST00000554186 SP7Q8TDD2 431 aaPredicted RBP15.39■□□□□ 0.05
LINC00520-201ENST00000554186 MYCNP04198 464 aaPredicted RBP15.35■□□□□ 0.05
LINC00520-201ENST00000554186 SLC4A1APQ9BWU0 796 aaKnown RBP15.28■□□□□ 0.04
LINC00520-201ENST00000554186 POLA2Q14181 598 aa15.21■□□□□ 0.03
LINC00520-201ENST00000554186 ATF5Q9Y2D1 282 aaPredicted RBP15.18■□□□□ 0.02
LINC00520-201ENST00000554186 FOXD4L1Q9NU39 408 aa15.15■□□□□ 0.02
LINC00520-201ENST00000554186 CHRDL2Q6WN34 429 aa15.12■□□□□ 0.01
LINC00520-201ENST00000554186 ZBTB22O15209 634 aa15.06■□□□□ 0
LINC00520-201ENST00000554186 RBM42Q9BTD8 480 aaKnown RBP15.02■□□□□ -0
LINC00520-201ENST00000554186 PLSCR2Q9NRY7 297 aa14.8□□□□□ -0.04
LINC00520-201ENST00000554186 OSCARQ8IYS5 282 aa14.77□□□□□ -0.05
LINC00520-201ENST00000554186 ZBTB12Q9Y330 459 aaPredicted RBP14.75□□□□□ -0.05
LINC00520-201ENST00000554186 AKT1S1Q96B36 256 aa14.71□□□□□ -0.05
LINC00520-201ENST00000554186 REM2Q8IYK8 340 aaPredicted RBP14.64□□□□□ -0.07
LINC00520-201ENST00000554186 ATXN8OSP0DMR3 200 aa14.63□□□□□ -0.07
LINC00520-201ENST00000554186 HAX1O00165 279 aa14.58□□□□□ -0.08
LINC00520-201ENST00000554186 PITPNM1O00562 1244 aa14.52□□□□□ -0.09
LINC00520-201ENST00000554186 PIP4P2Q8N4L2 257 aa14.52□□□□□ -0.09
LINC00520-201ENST00000554186 MKRN4PQ13434 485 aaPredicted RBP14.45□□□□□ -0.1
LINC00520-201ENST00000554186 LHX8Q68G74 356 aa14.42□□□□□ -0.1
LINC00520-201ENST00000554186 EVX2Q03828 476 aa14.4□□□□□ -0.1
LINC00520-201ENST00000554186 FBLN2P98095 1184 aa14.38□□□□□ -0.11
LINC00520-201ENST00000554186 FXR2P51116 673 aaKnown RBP eCLIP14.37□□□□□ -0.11
LINC00520-201ENST00000554186 SPDYE2BA6NHP3 402 aa14.35□□□□□ -0.11
LINC00520-201ENST00000554186 SPDYE6P0CI01 402 aa14.35□□□□□ -0.11
LINC00520-201ENST00000554186 SPDYE2Q495Y8 402 aa14.35□□□□□ -0.11
LINC00520-201ENST00000554186 SSUH2Q9Y2M2 353 aa14.21□□□□□ -0.13
LINC00520-201ENST00000554186 ZNF692Q9BU19 519 aaPredicted RBP14.19□□□□□ -0.14
LINC00520-201ENST00000554186 CSRNP3Q8WYN3 585 aa14.18□□□□□ -0.14
LINC00520-201ENST00000554186 CLEC11AQ9Y240 323 aa14.16□□□□□ -0.14
LINC00520-201ENST00000554186 SPDYE1Q8NFV5 336 aaPredicted RBP14.12□□□□□ -0.15
LINC00520-201ENST00000554186 PRKAR2AP13861 404 aaKnown RBP14.1□□□□□ -0.15
LINC00520-201ENST00000554186 PABPN1Q86U42 306 aaKnown RBP eCLIP14.01□□□□□ -0.17
LINC00520-201ENST00000554186 CHADLQ6NUI6 762 aa13.99□□□□□ -0.17
LINC00520-201ENST00000554186 EHMT2Q96KQ7 1210 aa13.94□□□□□ -0.18
LINC00520-201ENST00000554186 C19orf67A6NJJ6 358 aa13.93□□□□□ -0.18
LINC00520-201ENST00000554186 GABBR2O75899 941 aa13.91□□□□□ -0.18
LINC00520-201ENST00000554186 PRR29P0C7W0 189 aa13.87□□□□□ -0.19
LINC00520-201ENST00000554186 FARP1Q9Y4F1 1045 aaPredicted RBP13.69□□□□□ -0.22
LINC00520-201ENST00000554186 POTEMA6NI47 508 aa13.68□□□□□ -0.22
LINC00520-201ENST00000554186 POTEIP0CG38 1075 aa13.66□□□□□ -0.22
LINC00520-201ENST00000554186 CD44P16070 742 aaKnown RBP13.64□□□□□ -0.23
LINC00520-201ENST00000554186 SPDYE4A6NLX3 237 aa13.61□□□□□ -0.23
LINC00520-201ENST00000554186 CREBZFQ9NS37 354 aa13.59□□□□□ -0.23
LINC00520-201ENST00000554186 POTEGQ6S5H5 508 aa13.58□□□□□ -0.24
LINC00520-201ENST00000554186 STAG3Q9UJ98 1225 aa13.47□□□□□ -0.25
LINC00520-201ENST00000554186 PCDH10Q9P2E7 1040 aa13.44□□□□□ -0.26
LINC00520-201ENST00000554186 ZRANB1Q9UGI0 708 aa13.43□□□□□ -0.26
LINC00520-201ENST00000554186 ZNF579Q8NAF0 562 aaKnown RBP13.41□□□□□ -0.26
LINC00520-201ENST00000554186 OTUD5Q96G74 571 aa13.41□□□□□ -0.26
LINC00520-201ENST00000554186 MNX1P50219 401 aaPredicted RBP13.37□□□□□ -0.27
LINC00520-201ENST00000554186 GALR2O43603 387 aaPredicted RBP13.33□□□□□ -0.28
LINC00520-201ENST00000554186 PHF12Q96QT6 1004 aa13.31□□□□□ -0.28
LINC00520-201ENST00000554186 CLCN6P51797 869 aa13.29□□□□□ -0.28
LINC00520-201ENST00000554186 PROM2Q8N271 834 aa13.29□□□□□ -0.28
LINC00520-201ENST00000554186 DCBLD2Q96PD2 775 aa13.29□□□□□ -0.28
LINC00520-201ENST00000554186 POTEB2H3BUK9 544 aa13.19□□□□□ -0.3
LINC00520-201ENST00000554186 NPM1P06748 294 aaKnown RBP eCLIP13.19□□□□□ -0.3
LINC00520-201ENST00000554186 PAK3O75914 559 aaPredicted RBP13.18□□□□□ -0.3
LINC00520-201ENST00000554186 PELP1Q8IZL8 1130 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms