RNA–Protein interactions for RNA: ENST00000636938.1

CACNA1D-219, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1D, Length 6,868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-219ENST00000636938 NISCHQ9Y2I1 1504 aa15.87■□□□□ 0.13
CACNA1D-219ENST00000636938 HRCP23327 699 aa14.33□□□□□ -0.12
CACNA1D-219ENST00000636938 CHIC1Q5VXU3 224 aa13.96□□□□□ -0.17
CACNA1D-219ENST00000636938 MYO15BQ96JP2 1530 aa13.91□□□□□ -0.18
CACNA1D-219ENST00000636938 PPARGC1BQ86YN6 1023 aaKnown RBP13.79□□□□□ -0.2
CACNA1D-219ENST00000636938 DCAF1Q9Y4B6 1507 aa13.71□□□□□ -0.21
CACNA1D-219ENST00000636938 PCGF6Q9BYE7 350 aa13.64□□□□□ -0.23
CACNA1D-219ENST00000636938 PELP1Q8IZL8 1130 aaKnown RBP13.63□□□□□ -0.23
CACNA1D-219ENST00000636938 ZCCHC6Q5VYS8 1495 aaKnown RBP13.58□□□□□ -0.24
CACNA1D-219ENST00000636938 SUPT5HO00267 1087 aaKnown RBP13.52□□□□□ -0.25
CACNA1D-219ENST00000636938 SCAF1Q9H7N4 1312 aaKnown RBP13.52□□□□□ -0.25
CACNA1D-219ENST00000636938 SHROOM4Q9ULL8 1493 aa13.42□□□□□ -0.26
CACNA1D-219ENST00000636938 TRIM26Q12899 539 aaPredicted RBP13.32□□□□□ -0.28
CACNA1D-219ENST00000636938 LOC105371045A0A1W2PR82 267 aa13.31□□□□□ -0.28
CACNA1D-219ENST00000636938 CCDC180Q9P1Z9 1646 aa13.25□□□□□ -0.29
CACNA1D-219ENST00000636938 NEUROD1Q13562 356 aa13.14□□□□□ -0.31
CACNA1D-219ENST00000636938 ZEB1P37275 1124 aaPredicted RBP13.11□□□□□ -0.31
CACNA1D-219ENST00000636938 ACIN1Q9UKV3 1341 aaKnown RBP13.09□□□□□ -0.31
CACNA1D-219ENST00000636938 MYT1Q01538 1121 aa12.94□□□□□ -0.34
CACNA1D-219ENST00000636938 TRIM41Q8WV44 630 aa12.92□□□□□ -0.34
CACNA1D-219ENST00000636938 RSF1Q96T23 1441 aaPredicted RBP12.9□□□□□ -0.34
CACNA1D-219ENST00000636938 WRNQ14191 1432 aaPredicted RBP eCLIP12.81□□□□□ -0.36
CACNA1D-219ENST00000636938 GTF3C3Q9Y5Q9 886 aa12.8□□□□□ -0.36
CACNA1D-219ENST00000636938 ABCC9O60706 1549 aa12.72□□□□□ -0.37
CACNA1D-219ENST00000636938 DIEXFQ68CQ4 756 aaKnown RBP12.64□□□□□ -0.39
CACNA1D-219ENST00000636938 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.6□□□□□ -0.39
CACNA1D-219ENST00000636938 RB1CC1Q8TDY2 1594 aa12.56□□□□□ -0.4
CACNA1D-219ENST00000636938 EIF4G1Q04637 1599 aaKnown RBP12.54□□□□□ -0.4
CACNA1D-219ENST00000636938 CENPBP07199 599 aaPredicted RBP12.52□□□□□ -0.41
CACNA1D-219ENST00000636938 MIER1Q8N108 512 aa12.48□□□□□ -0.41
CACNA1D-219ENST00000636938 ZNF316A6NFI3 1004 aaPredicted RBP12.47□□□□□ -0.41
CACNA1D-219ENST00000636938 CECR2Q9BXF3 1484 aa12.45□□□□□ -0.42
CACNA1D-219ENST00000636938 TSHZ2Q9NRE2 1034 aa12.41□□□□□ -0.42
CACNA1D-219ENST00000636938 TTBK1Q5TCY1 1321 aaPredicted RBP12.4□□□□□ -0.42
CACNA1D-219ENST00000636938 TNIKQ9UKE5 1360 aa12.4□□□□□ -0.42
CACNA1D-219ENST00000636938 MROH2BQ7Z745 1585 aa12.36□□□□□ -0.43
CACNA1D-219ENST00000636938 CLSPNQ9HAW4 1339 aa12.36□□□□□ -0.43
CACNA1D-219ENST00000636938 CCER1Q8TC90 406 aaPredicted RBP12.35□□□□□ -0.43
CACNA1D-219ENST00000636938 FAM9AQ8IZU1 332 aaPredicted RBP12.35□□□□□ -0.43
CACNA1D-219ENST00000636938 CEP162Q5TB80 1403 aa12.34□□□□□ -0.43
CACNA1D-219ENST00000636938 SUPT16HQ9Y5B9 1047 aaKnown RBP12.31□□□□□ -0.44
CACNA1D-219ENST00000636938 CCDC88BA6NC98 1476 aa12.31□□□□□ -0.44
CACNA1D-219ENST00000636938 BCL11AQ9H165 835 aa12.28□□□□□ -0.44
CACNA1D-219ENST00000636938 ANP32EQ9BTT0 268 aa12.28□□□□□ -0.44
CACNA1D-219ENST00000636938 EEA1Q15075 1411 aa12.27□□□□□ -0.45
CACNA1D-219ENST00000636938 DCAF8L2P0C7V8 631 aa12.24□□□□□ -0.45
CACNA1D-219ENST00000636938 CSRNP3Q8WYN3 585 aa12.23□□□□□ -0.45
CACNA1D-219ENST00000636938 SOGA1O94964 1423 aa12.23□□□□□ -0.45
CACNA1D-219ENST00000636938 CUX2O14529 1486 aa12.19□□□□□ -0.46
CACNA1D-219ENST00000636938 DHX57Q6P158 1386 aaKnown RBP12.19□□□□□ -0.46
CACNA1D-219ENST00000636938 RUSC2Q8N2Y8 1516 aa12.19□□□□□ -0.46
CACNA1D-219ENST00000636938 CLIP1P30622 1438 aa12.17□□□□□ -0.46
CACNA1D-219ENST00000636938 VPS8Q8N3P4 1428 aa12.14□□□□□ -0.47
CACNA1D-219ENST00000636938 MSH5O43196 834 aa12.09□□□□□ -0.47
CACNA1D-219ENST00000636938 BAZ1AQ9NRL2 1556 aaPredicted RBP12.06□□□□□ -0.48
CACNA1D-219ENST00000636938 KCNH8Q96L42 1107 aa12.03□□□□□ -0.48
CACNA1D-219ENST00000636938 ABCC8Q09428 1581 aa12.03□□□□□ -0.48
CACNA1D-219ENST00000636938 WIZO95785 1651 aa12□□□□□ -0.49
CACNA1D-219ENST00000636938 NACADO15069 1562 aa12□□□□□ -0.49
CACNA1D-219ENST00000636938 RBM19Q9Y4C8 960 aaKnown RBP12□□□□□ -0.49
CACNA1D-219ENST00000636938 RRBP1Q9P2E9 1410 aaKnown RBP11.99□□□□□ -0.49
CACNA1D-219ENST00000636938 GOLGA3Q08378 1498 aa11.97□□□□□ -0.49
CACNA1D-219ENST00000636938 PRXQ9BXM0 1461 aa11.97□□□□□ -0.49
CACNA1D-219ENST00000636938 PRKCSHP14314 528 aaPredicted RBP11.96□□□□□ -0.49
CACNA1D-219ENST00000636938 SMARCA2P51531 1590 aa11.96□□□□□ -0.49
CACNA1D-219ENST00000636938 FANCIQ9NVI1 1328 aa11.95□□□□□ -0.5
CACNA1D-219ENST00000636938 YTHDC1Q96MU7 727 aaKnown RBP11.95□□□□□ -0.5
CACNA1D-219ENST00000636938 PPP1R15AO75807 674 aaPredicted RBP11.95□□□□□ -0.5
CACNA1D-219ENST00000636938 SCRIBQ14160 1630 aa11.93□□□□□ -0.5
CACNA1D-219ENST00000636938 CEP164Q9UPV0 1460 aa11.92□□□□□ -0.5
CACNA1D-219ENST00000636938 TOP2AP11388 1531 aaKnown RBP11.91□□□□□ -0.5
CACNA1D-219ENST00000636938 BAZ1BQ9UIG0 1483 aaKnown RBP11.91□□□□□ -0.5
CACNA1D-219ENST00000636938 MAPKBP1O60336 1514 aa11.9□□□□□ -0.5
CACNA1D-219ENST00000636938 KIF21BO75037 1637 aa11.89□□□□□ -0.51
CACNA1D-219ENST00000636938 EHMT2Q96KQ7 1210 aa11.87□□□□□ -0.51
CACNA1D-219ENST00000636938 RAPGEF2Q9Y4G8 1499 aa11.87□□□□□ -0.51
CACNA1D-219ENST00000636938 TIMELESSQ9UNS1 1208 aa11.86□□□□□ -0.51
CACNA1D-219ENST00000636938 HNRNPUL2Q1KMD3 747 aaKnown RBP11.86□□□□□ -0.51
CACNA1D-219ENST00000636938 ARAP1Q96P48 1450 aa11.86□□□□□ -0.51
CACNA1D-219ENST00000636938 KANK4Q5T7N3 995 aaPredicted RBP11.84□□□□□ -0.51
CACNA1D-219ENST00000636938 PEG3Q9GZU2 1588 aa11.84□□□□□ -0.51
CACNA1D-219ENST00000636938 KDM5BQ9UGL1 1544 aa11.8□□□□□ -0.52
CACNA1D-219ENST00000636938 CCER2I3L3R5 266 aa11.79□□□□□ -0.52
CACNA1D-219ENST00000636938 APLP2Q06481 763 aa11.77□□□□□ -0.52
CACNA1D-219ENST00000636938 SYNJ1O43426 1573 aa11.77□□□□□ -0.53
CACNA1D-219ENST00000636938 RNF123Q5XPI4 1314 aa11.76□□□□□ -0.53
CACNA1D-219ENST00000636938 CCNB3Q8WWL7 1395 aa11.74□□□□□ -0.53
CACNA1D-219ENST00000636938 MAP3K1Q13233 1512 aa11.73□□□□□ -0.53
CACNA1D-219ENST00000636938 UBTFP17480 764 aaKnown RBP11.71□□□□□ -0.53
CACNA1D-219ENST00000636938 ERICH6BQ5W0A0 696 aa11.71□□□□□ -0.53
CACNA1D-219ENST00000636938 SMARCA4P51532 1647 aa11.71□□□□□ -0.53
CACNA1D-219ENST00000636938 ERICH3Q5RHP9 1530 aa11.71□□□□□ -0.54
CACNA1D-219ENST00000636938 RAB3GAP2Q9H2M9 1393 aa11.69□□□□□ -0.54
CACNA1D-219ENST00000636938 WDR97A6NE52 1622 aa11.69□□□□□ -0.54
CACNA1D-219ENST00000636938 C11orf95C9JLR9 678 aaPredicted RBP11.69□□□□□ -0.54
CACNA1D-219ENST00000636938 FKBP8Q14318 412 aa11.68□□□□□ -0.54
CACNA1D-219ENST00000636938 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.67□□□□□ -0.54
CACNA1D-219ENST00000636938 ARHGAP35Q9NRY4 1499 aa11.65□□□□□ -0.54
CACNA1D-219ENST00000636938 WASHC2AQ641Q2 1341 aa11.64□□□□□ -0.55
CACNA1D-219ENST00000636938 DENND4BO75064 1496 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms