Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
AP4B1Q9Y6B7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP4B1Q9Y6B7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP4B1Q9Y6B7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP4B1Q9Y6B7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
AP4B1Q9Y6B7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
AP4B1Q9Y6B7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP4B1Q9Y6B7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.8■□□□□ 0.6
AP4B1Q9Y6B7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.79■□□□□ 0.6
AP4B1Q9Y6B7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP4B1Q9Y6B7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.79■□□□□ 0.6
AP4B1Q9Y6B7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP4B1Q9Y6B7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP4B1Q9Y6B7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP4B1Q9Y6B7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.79■□□□□ 0.6
AP4B1Q9Y6B7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP4B1Q9Y6B7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP4B1Q9Y6B7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP4B1Q9Y6B7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.79■□□□□ 0.6
AP4B1Q9Y6B7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.79■□□□□ 0.6
AP4B1Q9Y6B7 CNN2P6-201ENST00000439038 900 ntBASIC18.79■□□□□ 0.6
AP4B1Q9Y6B7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.79■□□□□ 0.6
AP4B1Q9Y6B7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP4B1Q9Y6B7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP4B1Q9Y6B7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
AP4B1Q9Y6B7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AP4B1Q9Y6B7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP4B1Q9Y6B7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
AP4B1Q9Y6B7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
AP4B1Q9Y6B7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP4B1Q9Y6B7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
AP4B1Q9Y6B7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP4B1Q9Y6B7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
AP4B1Q9Y6B7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP4B1Q9Y6B7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP4B1Q9Y6B7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.78■□□□□ 0.6
AP4B1Q9Y6B7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP4B1Q9Y6B7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP4B1Q9Y6B7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP4B1Q9Y6B7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP4B1Q9Y6B7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.78■□□□□ 0.6
AP4B1Q9Y6B7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP4B1Q9Y6B7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AP4B1Q9Y6B7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP4B1Q9Y6B7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP4B1Q9Y6B7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
AP4B1Q9Y6B7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP4B1Q9Y6B7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.77■□□□□ 0.6
AP4B1Q9Y6B7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.77■□□□□ 0.6
AP4B1Q9Y6B7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
AP4B1Q9Y6B7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AP4B1Q9Y6B7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AP4B1Q9Y6B7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
AP4B1Q9Y6B7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP4B1Q9Y6B7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.77■□□□□ 0.6
AP4B1Q9Y6B7 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.77■□□□□ 0.6
AP4B1Q9Y6B7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.77■□□□□ 0.6
AP4B1Q9Y6B7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AP4B1Q9Y6B7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
AP4B1Q9Y6B7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.77■□□□□ 0.6
AP4B1Q9Y6B7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP4B1Q9Y6B7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP4B1Q9Y6B7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP4B1Q9Y6B7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AP4B1Q9Y6B7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.77■□□□□ 0.6
AP4B1Q9Y6B7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
AP4B1Q9Y6B7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
AP4B1Q9Y6B7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
AP4B1Q9Y6B7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.77■□□□□ 0.59
AP4B1Q9Y6B7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
AP4B1Q9Y6B7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP4B1Q9Y6B7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
AP4B1Q9Y6B7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
AP4B1Q9Y6B7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.76■□□□□ 0.59
AP4B1Q9Y6B7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP4B1Q9Y6B7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
AP4B1Q9Y6B7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
AP4B1Q9Y6B7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP4B1Q9Y6B7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP4B1Q9Y6B7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
AP4B1Q9Y6B7 AC006970.2-201ENST00000450065 779 ntBASIC18.76■□□□□ 0.59
AP4B1Q9Y6B7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.76■□□□□ 0.59
AP4B1Q9Y6B7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
AP4B1Q9Y6B7 AL162412.1-201ENST00000567129 965 ntBASIC18.76■□□□□ 0.59
AP4B1Q9Y6B7 AC005181.1-201ENST00000604782 1256 ntBASIC18.76■□□□□ 0.59
AP4B1Q9Y6B7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
AP4B1Q9Y6B7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP4B1Q9Y6B7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP4B1Q9Y6B7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
AP4B1Q9Y6B7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
AP4B1Q9Y6B7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.76■□□□□ 0.59
AP4B1Q9Y6B7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP4B1Q9Y6B7 LINC01465-201ENST00000408887 1940 ntBASIC18.76■□□□□ 0.59
AP4B1Q9Y6B7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
AP4B1Q9Y6B7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
AP4B1Q9Y6B7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP4B1Q9Y6B7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP4B1Q9Y6B7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.76■□□□□ 0.59
AP4B1Q9Y6B7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
AP4B1Q9Y6B7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms