Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LSM4Q9Y4Z0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LSM4Q9Y4Z0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
LSM4Q9Y4Z0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.68■□□□□ 0.1
LSM4Q9Y4Z0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LSM4Q9Y4Z0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LSM4Q9Y4Z0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LSM4Q9Y4Z0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LSM4Q9Y4Z0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LSM4Q9Y4Z0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.68■□□□□ 0.1
LSM4Q9Y4Z0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LSM4Q9Y4Z0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC15.68■□□□□ 0.1
LSM4Q9Y4Z0 PGM5P4-201ENST00000421970 445 ntBASIC15.68■□□□□ 0.1
LSM4Q9Y4Z0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC15.68■□□□□ 0.1
LSM4Q9Y4Z0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC15.68■□□□□ 0.1
LSM4Q9Y4Z0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC15.68■□□□□ 0.1
LSM4Q9Y4Z0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.68■□□□□ 0.1
LSM4Q9Y4Z0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.68■□□□□ 0.1
LSM4Q9Y4Z0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LSM4Q9Y4Z0 MYC-209ENST00000641252 345 ntBASIC15.68■□□□□ 0.1
LSM4Q9Y4Z0 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LSM4Q9Y4Z0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LSM4Q9Y4Z0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LSM4Q9Y4Z0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LSM4Q9Y4Z0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LSM4Q9Y4Z0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LSM4Q9Y4Z0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 AC097658.1-201ENST00000475555 843 ntBASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 AC083880.1-201ENST00000608266 535 ntBASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LSM4Q9Y4Z0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 CDV3P1-201ENST00000471403 739 ntBASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 RARRES2P4-201ENST00000514074 484 ntBASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 ADM-205ENST00000528544 586 ntTSL 2 BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 AL162412.1-201ENST00000567129 965 ntBASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 AL356652.1-201ENST00000615962 565 ntBASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 AC087633.2-202ENST00000565166 1439 ntBASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
LSM4Q9Y4Z0 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms