Protein–RNA interactions for Protein: Q9P109

GCNT4, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT4Q9P109 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.36■■□□□ 1.01
GCNT4Q9P109 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
GCNT4Q9P109 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
GCNT4Q9P109 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.36■■□□□ 1.01
GCNT4Q9P109 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
GCNT4Q9P109 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
GCNT4Q9P109 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.36■■□□□ 1.01
GCNT4Q9P109 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
GCNT4Q9P109 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.35■■□□□ 1.01
GCNT4Q9P109 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.35■■□□□ 1.01
GCNT4Q9P109 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
GCNT4Q9P109 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.35■■□□□ 1.01
GCNT4Q9P109 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GCNT4Q9P109 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
GCNT4Q9P109 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GCNT4Q9P109 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
GCNT4Q9P109 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.35■■□□□ 1.01
GCNT4Q9P109 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
GCNT4Q9P109 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
GCNT4Q9P109 PNMA6B-201ENST00000538162 1200 ntBASIC21.35■■□□□ 1.01
GCNT4Q9P109 AC006557.6-201ENST00000623071 864 ntBASIC21.35■■□□□ 1.01
GCNT4Q9P109 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.35■■□□□ 1.01
GCNT4Q9P109 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GCNT4Q9P109 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GCNT4Q9P109 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
GCNT4Q9P109 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.35■■□□□ 1.01
GCNT4Q9P109 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.35■■□□□ 1.01
GCNT4Q9P109 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
GCNT4Q9P109 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
GCNT4Q9P109 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.34■■□□□ 1.01
GCNT4Q9P109 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
GCNT4Q9P109 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
GCNT4Q9P109 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.34■■□□□ 1.01
GCNT4Q9P109 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
GCNT4Q9P109 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GCNT4Q9P109 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GCNT4Q9P109 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.34■■□□□ 1.01
GCNT4Q9P109 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.34■■□□□ 1.01
GCNT4Q9P109 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.34■■□□□ 1.01
GCNT4Q9P109 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.34■■□□□ 1.01
GCNT4Q9P109 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.34■■□□□ 1.01
GCNT4Q9P109 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
GCNT4Q9P109 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
GCNT4Q9P109 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
GCNT4Q9P109 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
GCNT4Q9P109 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.34■■□□□ 1.01
GCNT4Q9P109 AC093484.2-201ENST00000580996 2166 ntBASIC21.34■■□□□ 1.01
GCNT4Q9P109 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
GCNT4Q9P109 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.34■■□□□ 1.01
GCNT4Q9P109 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.34■■□□□ 1.01
GCNT4Q9P109 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
GCNT4Q9P109 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.34■■□□□ 1.01
GCNT4Q9P109 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
GCNT4Q9P109 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GCNT4Q9P109 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
GCNT4Q9P109 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
GCNT4Q9P109 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.33■■□□□ 1.01
GCNT4Q9P109 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
GCNT4Q9P109 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
GCNT4Q9P109 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
GCNT4Q9P109 AC092368.3-202ENST00000574180 1591 ntBASIC21.33■■□□□ 1.01
GCNT4Q9P109 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
GCNT4Q9P109 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
GCNT4Q9P109 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
GCNT4Q9P109 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.33■■□□□ 1.01
GCNT4Q9P109 GCSHP5-201ENST00000443090 522 ntBASIC21.33■■□□□ 1.01
GCNT4Q9P109 RPS2P52-201ENST00000469610 820 ntBASIC21.33■■□□□ 1.01
GCNT4Q9P109 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.33■■□□□ 1.01
GCNT4Q9P109 AC073648.6-201ENST00000641589 218 ntBASIC21.33■■□□□ 1.01
GCNT4Q9P109 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
GCNT4Q9P109 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
GCNT4Q9P109 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.32■■□□□ 1
GCNT4Q9P109 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
GCNT4Q9P109 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
GCNT4Q9P109 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.32■■□□□ 1
GCNT4Q9P109 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.32■■□□□ 1
GCNT4Q9P109 AC124283.5-201ENST00000624661 1809 ntBASIC21.32■■□□□ 1
GCNT4Q9P109 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GCNT4Q9P109 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
GCNT4Q9P109 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.32■■□□□ 1
GCNT4Q9P109 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
GCNT4Q9P109 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
GCNT4Q9P109 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.32■■□□□ 1
GCNT4Q9P109 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
GCNT4Q9P109 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
GCNT4Q9P109 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
GCNT4Q9P109 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.32■■□□□ 1
GCNT4Q9P109 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GCNT4Q9P109 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.32■■□□□ 1
GCNT4Q9P109 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
GCNT4Q9P109 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.32■■□□□ 1
GCNT4Q9P109 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.32■■□□□ 1
GCNT4Q9P109 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.32■■□□□ 1
GCNT4Q9P109 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
GCNT4Q9P109 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GCNT4Q9P109 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
GCNT4Q9P109 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GCNT4Q9P109 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GCNT4Q9P109 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
GCNT4Q9P109 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms