Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC28.24■■■□□ 2.11
SLC52A1Q9NWF4 AL160286.2-201ENST00000567150 934 ntBASIC28.24■■■□□ 2.11
SLC52A1Q9NWF4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC28.24■■■□□ 2.11
SLC52A1Q9NWF4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC28.24■■■□□ 2.11
SLC52A1Q9NWF4 AC008622.2-201ENST00000617006 1229 ntBASIC28.24■■■□□ 2.11
SLC52A1Q9NWF4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SLC52A1Q9NWF4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
SLC52A1Q9NWF4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SLC52A1Q9NWF4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SLC52A1Q9NWF4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SLC52A1Q9NWF4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SLC52A1Q9NWF4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC28.23■■■□□ 2.11
SLC52A1Q9NWF4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
SLC52A1Q9NWF4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC28.23■■■□□ 2.11
SLC52A1Q9NWF4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC28.23■■■□□ 2.11
SLC52A1Q9NWF4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC28.23■■■□□ 2.11
SLC52A1Q9NWF4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SLC52A1Q9NWF4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SLC52A1Q9NWF4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC28.23■■■□□ 2.11
SLC52A1Q9NWF4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SLC52A1Q9NWF4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
SLC52A1Q9NWF4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SLC52A1Q9NWF4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
SLC52A1Q9NWF4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC28.22■■■□□ 2.11
SLC52A1Q9NWF4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC28.22■■■□□ 2.11
SLC52A1Q9NWF4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC28.22■■■□□ 2.11
SLC52A1Q9NWF4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC28.22■■■□□ 2.11
SLC52A1Q9NWF4 AL441883.1-201ENST00000566170 1045 ntBASIC28.22■■■□□ 2.11
SLC52A1Q9NWF4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC28.22■■■□□ 2.11
SLC52A1Q9NWF4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC28.22■■■□□ 2.11
SLC52A1Q9NWF4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
SLC52A1Q9NWF4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SLC52A1Q9NWF4 IER3-202ENST00000376377 1350 ntBASIC28.22■■■□□ 2.11
SLC52A1Q9NWF4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
SLC52A1Q9NWF4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SLC52A1Q9NWF4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
SLC52A1Q9NWF4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
SLC52A1Q9NWF4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SLC52A1Q9NWF4 KRT18P48-201ENST00000434763 852 ntBASIC28.21■■■□□ 2.11
SLC52A1Q9NWF4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC28.21■■■□□ 2.11
SLC52A1Q9NWF4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
SLC52A1Q9NWF4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC28.21■■■□□ 2.11
SLC52A1Q9NWF4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC28.21■■■□□ 2.11
SLC52A1Q9NWF4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
SLC52A1Q9NWF4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
SLC52A1Q9NWF4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC28.21■■■□□ 2.11
SLC52A1Q9NWF4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
SLC52A1Q9NWF4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
SLC52A1Q9NWF4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
SLC52A1Q9NWF4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
SLC52A1Q9NWF4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC28.2■■■□□ 2.1
SLC52A1Q9NWF4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
SLC52A1Q9NWF4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SLC52A1Q9NWF4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SLC52A1Q9NWF4 AL671277.2-201ENST00000458060 996 ntBASIC28.2■■■□□ 2.1
SLC52A1Q9NWF4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC28.2■■■□□ 2.1
SLC52A1Q9NWF4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC28.2■■■□□ 2.1
SLC52A1Q9NWF4 AC116407.4-201ENST00000623319 1061 ntBASIC28.2■■■□□ 2.1
SLC52A1Q9NWF4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC28.2■■■□□ 2.1
SLC52A1Q9NWF4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC28.2■■■□□ 2.1
SLC52A1Q9NWF4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC28.2■■■□□ 2.1
SLC52A1Q9NWF4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
SLC52A1Q9NWF4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC28.2■■■□□ 2.1
SLC52A1Q9NWF4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SLC52A1Q9NWF4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC28.19■■■□□ 2.1
SLC52A1Q9NWF4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC28.19■■■□□ 2.1
SLC52A1Q9NWF4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC28.19■■■□□ 2.1
SLC52A1Q9NWF4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
SLC52A1Q9NWF4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC28.19■■■□□ 2.1
SLC52A1Q9NWF4 CKBP1-201ENST00000565489 1086 ntBASIC28.19■■■□□ 2.1
SLC52A1Q9NWF4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC28.19■■■□□ 2.1
SLC52A1Q9NWF4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC28.19■■■□□ 2.1
SLC52A1Q9NWF4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SLC52A1Q9NWF4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SLC52A1Q9NWF4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC28.18■■■□□ 2.1
SLC52A1Q9NWF4 AC012676.1-201ENST00000574705 1949 ntBASIC28.18■■■□□ 2.1
SLC52A1Q9NWF4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SLC52A1Q9NWF4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SLC52A1Q9NWF4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SLC52A1Q9NWF4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SLC52A1Q9NWF4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SLC52A1Q9NWF4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SLC52A1Q9NWF4 PRSS44-201ENST00000515154 1146 ntBASIC28.18■■■□□ 2.1
SLC52A1Q9NWF4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC28.18■■■□□ 2.1
SLC52A1Q9NWF4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
SLC52A1Q9NWF4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SLC52A1Q9NWF4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC28.18■■■□□ 2.1
SLC52A1Q9NWF4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SLC52A1Q9NWF4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC28.18■■■□□ 2.1
SLC52A1Q9NWF4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
SLC52A1Q9NWF4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
SLC52A1Q9NWF4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SLC52A1Q9NWF4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SLC52A1Q9NWF4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SLC52A1Q9NWF4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SLC52A1Q9NWF4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC28.17■■■□□ 2.1
SLC52A1Q9NWF4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC28.17■■■□□ 2.1
SLC52A1Q9NWF4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC28.17■■■□□ 2.1
SLC52A1Q9NWF4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC28.17■■■□□ 2.1
SLC52A1Q9NWF4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC28.17■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms