Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CYSTM1Q9H1C7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC11.47□□□□□ -0.57
CYSTM1Q9H1C7 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CYSTM1Q9H1C7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CYSTM1Q9H1C7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
CYSTM1Q9H1C7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CYSTM1Q9H1C7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CYSTM1Q9H1C7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CYSTM1Q9H1C7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC11.47□□□□□ -0.57
CYSTM1Q9H1C7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC11.47□□□□□ -0.57
CYSTM1Q9H1C7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CYSTM1Q9H1C7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CYSTM1Q9H1C7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CYSTM1Q9H1C7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CYSTM1Q9H1C7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
CYSTM1Q9H1C7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC11.47□□□□□ -0.57
CYSTM1Q9H1C7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC11.47□□□□□ -0.57
CYSTM1Q9H1C7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC11.47□□□□□ -0.57
CYSTM1Q9H1C7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC11.47□□□□□ -0.57
CYSTM1Q9H1C7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC11.47□□□□□ -0.57
CYSTM1Q9H1C7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CYSTM1Q9H1C7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
CYSTM1Q9H1C7 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CYSTM1Q9H1C7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
CYSTM1Q9H1C7 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CYSTM1Q9H1C7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
CYSTM1Q9H1C7 AC132872.4-202ENST00000622924 2756 ntBASIC11.46□□□□□ -0.57
CYSTM1Q9H1C7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CYSTM1Q9H1C7 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
CYSTM1Q9H1C7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC11.46□□□□□ -0.57
CYSTM1Q9H1C7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC11.46□□□□□ -0.57
CYSTM1Q9H1C7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC11.46□□□□□ -0.57
CYSTM1Q9H1C7 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CYSTM1Q9H1C7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CYSTM1Q9H1C7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC11.46□□□□□ -0.57
CYSTM1Q9H1C7 AC138932.1-201ENST00000534164 6830 ntBASIC11.46□□□□□ -0.57
CYSTM1Q9H1C7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CYSTM1Q9H1C7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CYSTM1Q9H1C7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
CYSTM1Q9H1C7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
CYSTM1Q9H1C7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CYSTM1Q9H1C7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CYSTM1Q9H1C7 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC11.46□□□□□ -0.58
CYSTM1Q9H1C7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CYSTM1Q9H1C7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
CYSTM1Q9H1C7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
CYSTM1Q9H1C7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC11.46□□□□□ -0.58
CYSTM1Q9H1C7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.58
CYSTM1Q9H1C7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
CYSTM1Q9H1C7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CYSTM1Q9H1C7 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CYSTM1Q9H1C7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC11.46□□□□□ -0.58
CYSTM1Q9H1C7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CYSTM1Q9H1C7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
CYSTM1Q9H1C7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
CYSTM1Q9H1C7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CYSTM1Q9H1C7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
CYSTM1Q9H1C7 AL359258.2-201ENST00000564063 1566 ntBASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 TMEM179-206ENST00000616017 1645 ntBASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
CYSTM1Q9H1C7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms