Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM55Q9BYV6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM55Q9BYV6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TRIM55Q9BYV6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM55Q9BYV6 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM55Q9BYV6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM55Q9BYV6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
TRIM55Q9BYV6 CYP2T1P-201ENST00000432607 1285 ntBASIC19.75■□□□□ 0.75
TRIM55Q9BYV6 TERF1P5-201ENST00000477545 1207 ntBASIC19.75■□□□□ 0.75
TRIM55Q9BYV6 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.75■□□□□ 0.75
TRIM55Q9BYV6 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM55Q9BYV6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM55Q9BYV6 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
TRIM55Q9BYV6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TRIM55Q9BYV6 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM55Q9BYV6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TRIM55Q9BYV6 NEFHP1-201ENST00000412845 2629 ntBASIC19.75■□□□□ 0.75
TRIM55Q9BYV6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM55Q9BYV6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM55Q9BYV6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM55Q9BYV6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM55Q9BYV6 AC068338.2-201ENST00000563278 1430 ntBASIC19.75■□□□□ 0.75
TRIM55Q9BYV6 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TRIM55Q9BYV6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM55Q9BYV6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TRIM55Q9BYV6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM55Q9BYV6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM55Q9BYV6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM55Q9BYV6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM55Q9BYV6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TRIM55Q9BYV6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM55Q9BYV6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM55Q9BYV6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM55Q9BYV6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TRIM55Q9BYV6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.74■□□□□ 0.75
TRIM55Q9BYV6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM55Q9BYV6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM55Q9BYV6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM55Q9BYV6 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM55Q9BYV6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TRIM55Q9BYV6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM55Q9BYV6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM55Q9BYV6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM55Q9BYV6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM55Q9BYV6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM55Q9BYV6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TRIM55Q9BYV6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TRIM55Q9BYV6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM55Q9BYV6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM55Q9BYV6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
TRIM55Q9BYV6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM55Q9BYV6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM55Q9BYV6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM55Q9BYV6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TRIM55Q9BYV6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM55Q9BYV6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM55Q9BYV6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM55Q9BYV6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM55Q9BYV6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRIM55Q9BYV6 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM55Q9BYV6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.73■□□□□ 0.75
TRIM55Q9BYV6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.73■□□□□ 0.75
TRIM55Q9BYV6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM55Q9BYV6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TRIM55Q9BYV6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM55Q9BYV6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM55Q9BYV6 KRT8P36-201ENST00000489121 1440 ntBASIC19.73■□□□□ 0.75
TRIM55Q9BYV6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM55Q9BYV6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM55Q9BYV6 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM55Q9BYV6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TRIM55Q9BYV6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM55Q9BYV6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM55Q9BYV6 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM55Q9BYV6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM55Q9BYV6 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM55Q9BYV6 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM55Q9BYV6 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM55Q9BYV6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM55Q9BYV6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM55Q9BYV6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM55Q9BYV6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM55Q9BYV6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM55Q9BYV6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM55Q9BYV6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.72■□□□□ 0.75
TRIM55Q9BYV6 SLC7A5P1-201ENST00000568957 537 ntBASIC19.72■□□□□ 0.75
TRIM55Q9BYV6 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM55Q9BYV6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.72■□□□□ 0.75
TRIM55Q9BYV6 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.72■□□□□ 0.75
TRIM55Q9BYV6 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.72■□□□□ 0.75
TRIM55Q9BYV6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM55Q9BYV6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM55Q9BYV6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
TRIM55Q9BYV6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM55Q9BYV6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM55Q9BYV6 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM55Q9BYV6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.71■□□□□ 0.75
TRIM55Q9BYV6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM55Q9BYV6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM55Q9BYV6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms