Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH3KBP1Q96B97 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SH3KBP1Q96B97 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SH3KBP1Q96B97 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH3KBP1Q96B97 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.44■□□□□ 0.7
SH3KBP1Q96B97 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH3KBP1Q96B97 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH3KBP1Q96B97 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SH3KBP1Q96B97 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3KBP1Q96B97 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3KBP1Q96B97 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3KBP1Q96B97 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3KBP1Q96B97 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SH3KBP1Q96B97 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.43■□□□□ 0.7
SH3KBP1Q96B97 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3KBP1Q96B97 KRASP1-201ENST00000407852 552 ntBASIC19.43■□□□□ 0.7
SH3KBP1Q96B97 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.43■□□□□ 0.7
SH3KBP1Q96B97 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SH3KBP1Q96B97 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.43■□□□□ 0.7
SH3KBP1Q96B97 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.43■□□□□ 0.7
SH3KBP1Q96B97 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.43■□□□□ 0.7
SH3KBP1Q96B97 AL121906.2-201ENST00000621597 723 ntBASIC19.43■□□□□ 0.7
SH3KBP1Q96B97 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3KBP1Q96B97 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SH3KBP1Q96B97 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SH3KBP1Q96B97 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.43■□□□□ 0.7
SH3KBP1Q96B97 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
SH3KBP1Q96B97 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
SH3KBP1Q96B97 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3KBP1Q96B97 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3KBP1Q96B97 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH3KBP1Q96B97 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH3KBP1Q96B97 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.42■□□□□ 0.7
SH3KBP1Q96B97 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH3KBP1Q96B97 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.42■□□□□ 0.7
SH3KBP1Q96B97 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
SH3KBP1Q96B97 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH3KBP1Q96B97 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH3KBP1Q96B97 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.42■□□□□ 0.7
SH3KBP1Q96B97 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH3KBP1Q96B97 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SH3KBP1Q96B97 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
SH3KBP1Q96B97 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.42■□□□□ 0.7
SH3KBP1Q96B97 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.42■□□□□ 0.7
SH3KBP1Q96B97 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SH3KBP1Q96B97 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH3KBP1Q96B97 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH3KBP1Q96B97 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH3KBP1Q96B97 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH3KBP1Q96B97 KRT8P17-201ENST00000453110 1448 ntBASIC19.42■□□□□ 0.7
SH3KBP1Q96B97 AL135905.2-201ENST00000584934 1404 ntBASIC19.42■□□□□ 0.7
SH3KBP1Q96B97 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH3KBP1Q96B97 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH3KBP1Q96B97 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SH3KBP1Q96B97 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH3KBP1Q96B97 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH3KBP1Q96B97 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.41■□□□□ 0.7
SH3KBP1Q96B97 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH3KBP1Q96B97 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH3KBP1Q96B97 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH3KBP1Q96B97 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH3KBP1Q96B97 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH3KBP1Q96B97 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH3KBP1Q96B97 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.41■□□□□ 0.7
SH3KBP1Q96B97 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
SH3KBP1Q96B97 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.41■□□□□ 0.7
SH3KBP1Q96B97 AP001412.1-201ENST00000608405 714 ntBASIC19.41■□□□□ 0.7
SH3KBP1Q96B97 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH3KBP1Q96B97 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SH3KBP1Q96B97 AC112907.3-201ENST00000577781 2400 ntBASIC19.41■□□□□ 0.7
SH3KBP1Q96B97 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.4■□□□□ 0.7
SH3KBP1Q96B97 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
SH3KBP1Q96B97 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SH3KBP1Q96B97 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SH3KBP1Q96B97 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.4■□□□□ 0.7
SH3KBP1Q96B97 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3KBP1Q96B97 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.4■□□□□ 0.7
SH3KBP1Q96B97 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3KBP1Q96B97 AL162377.1-201ENST00000618844 1793 ntBASIC19.4■□□□□ 0.7
SH3KBP1Q96B97 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
SH3KBP1Q96B97 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3KBP1Q96B97 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3KBP1Q96B97 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SH3KBP1Q96B97 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.4■□□□□ 0.7
SH3KBP1Q96B97 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SH3KBP1Q96B97 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.4■□□□□ 0.7
SH3KBP1Q96B97 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.4■□□□□ 0.7
SH3KBP1Q96B97 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.4■□□□□ 0.7
SH3KBP1Q96B97 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.4■□□□□ 0.7
SH3KBP1Q96B97 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3KBP1Q96B97 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3KBP1Q96B97 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.4■□□□□ 0.7
SH3KBP1Q96B97 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.4■□□□□ 0.7
SH3KBP1Q96B97 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SH3KBP1Q96B97 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SH3KBP1Q96B97 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SH3KBP1Q96B97 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SH3KBP1Q96B97 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.4■□□□□ 0.7
SH3KBP1Q96B97 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3KBP1Q96B97 PTBP1P-201ENST00000554374 1601 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms