Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
SCAMP4Q969E2 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCAMP4Q969E2 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCAMP4Q969E2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SCAMP4Q969E2 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCAMP4Q969E2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCAMP4Q969E2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCAMP4Q969E2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCAMP4Q969E2 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCAMP4Q969E2 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCAMP4Q969E2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCAMP4Q969E2 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.53■□□□□ 0.72
SCAMP4Q969E2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCAMP4Q969E2 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.53■□□□□ 0.72
SCAMP4Q969E2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCAMP4Q969E2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.53■□□□□ 0.72
SCAMP4Q969E2 TMEM179-206ENST00000616017 1645 ntBASIC19.53■□□□□ 0.72
SCAMP4Q969E2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCAMP4Q969E2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCAMP4Q969E2 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SCAMP4Q969E2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCAMP4Q969E2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCAMP4Q969E2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.53■□□□□ 0.72
SCAMP4Q969E2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCAMP4Q969E2 HTR7P1-201ENST00000538670 1336 ntBASIC19.52■□□□□ 0.72
SCAMP4Q969E2 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCAMP4Q969E2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SCAMP4Q969E2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SCAMP4Q969E2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.52■□□□□ 0.72
SCAMP4Q969E2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SCAMP4Q969E2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SCAMP4Q969E2 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCAMP4Q969E2 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SCAMP4Q969E2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.52■□□□□ 0.72
SCAMP4Q969E2 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCAMP4Q969E2 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.52■□□□□ 0.72
SCAMP4Q969E2 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.52■□□□□ 0.72
SCAMP4Q969E2 RARRES2P10-201ENST00000564312 460 ntBASIC19.52■□□□□ 0.72
SCAMP4Q969E2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.52■□□□□ 0.72
SCAMP4Q969E2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.52■□□□□ 0.72
SCAMP4Q969E2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCAMP4Q969E2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.52■□□□□ 0.72
SCAMP4Q969E2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.52■□□□□ 0.72
SCAMP4Q969E2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCAMP4Q969E2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCAMP4Q969E2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCAMP4Q969E2 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SCAMP4Q969E2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
SCAMP4Q969E2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SCAMP4Q969E2 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.71
SCAMP4Q969E2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SCAMP4Q969E2 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.51■□□□□ 0.71
SCAMP4Q969E2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCAMP4Q969E2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCAMP4Q969E2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SCAMP4Q969E2 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCAMP4Q969E2 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.51■□□□□ 0.71
SCAMP4Q969E2 RPS2P55-201ENST00000397318 883 ntBASIC19.51■□□□□ 0.71
SCAMP4Q969E2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCAMP4Q969E2 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SCAMP4Q969E2 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
SCAMP4Q969E2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCAMP4Q969E2 AC107956.1-201ENST00000494359 873 ntBASIC19.51■□□□□ 0.71
SCAMP4Q969E2 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.51■□□□□ 0.71
SCAMP4Q969E2 KRT18P16-201ENST00000510337 1294 ntBASIC19.51■□□□□ 0.71
SCAMP4Q969E2 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.51■□□□□ 0.71
SCAMP4Q969E2 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SCAMP4Q969E2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.51■□□□□ 0.71
SCAMP4Q969E2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.51■□□□□ 0.71
SCAMP4Q969E2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SCAMP4Q969E2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SCAMP4Q969E2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCAMP4Q969E2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCAMP4Q969E2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCAMP4Q969E2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCAMP4Q969E2 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCAMP4Q969E2 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.51■□□□□ 0.71
SCAMP4Q969E2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCAMP4Q969E2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.51■□□□□ 0.71
SCAMP4Q969E2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SCAMP4Q969E2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
SCAMP4Q969E2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.5■□□□□ 0.71
SCAMP4Q969E2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.5■□□□□ 0.71
SCAMP4Q969E2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.5■□□□□ 0.71
SCAMP4Q969E2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.5■□□□□ 0.71
SCAMP4Q969E2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.5■□□□□ 0.71
SCAMP4Q969E2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SCAMP4Q969E2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.5■□□□□ 0.71
SCAMP4Q969E2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.5■□□□□ 0.71
SCAMP4Q969E2 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SCAMP4Q969E2 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SCAMP4Q969E2 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.5■□□□□ 0.71
SCAMP4Q969E2 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.5■□□□□ 0.71
SCAMP4Q969E2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SCAMP4Q969E2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.5■□□□□ 0.71
SCAMP4Q969E2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SCAMP4Q969E2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SCAMP4Q969E2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SCAMP4Q969E2 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
SCAMP4Q969E2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms