Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40AQ8WXH6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40AQ8WXH6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40AQ8WXH6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40AQ8WXH6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RAB40AQ8WXH6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40AQ8WXH6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB40AQ8WXH6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.22■□□□□ 0.35
RAB40AQ8WXH6 AL162412.1-201ENST00000567129 965 ntBASIC17.22■□□□□ 0.35
RAB40AQ8WXH6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.22■□□□□ 0.35
RAB40AQ8WXH6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RAB40AQ8WXH6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40AQ8WXH6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40AQ8WXH6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40AQ8WXH6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40AQ8WXH6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB40AQ8WXH6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 LINC01465-201ENST00000408887 1940 ntBASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 AL138781.2-201ENST00000617896 1843 ntBASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40AQ8WXH6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RAB40AQ8WXH6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40AQ8WXH6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40AQ8WXH6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.2■□□□□ 0.34
RAB40AQ8WXH6 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.2■□□□□ 0.34
RAB40AQ8WXH6 AC009237.14-201ENST00000609975 1594 ntBASIC17.2■□□□□ 0.34
RAB40AQ8WXH6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40AQ8WXH6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40AQ8WXH6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40AQ8WXH6 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RAB40AQ8WXH6 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.2■□□□□ 0.34
RAB40AQ8WXH6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40AQ8WXH6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RAB40AQ8WXH6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RAB40AQ8WXH6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40AQ8WXH6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.2■□□□□ 0.34
RAB40AQ8WXH6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40AQ8WXH6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.2■□□□□ 0.34
RAB40AQ8WXH6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.2■□□□□ 0.34
RAB40AQ8WXH6 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.2■□□□□ 0.34
RAB40AQ8WXH6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.2■□□□□ 0.34
RAB40AQ8WXH6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RAB40AQ8WXH6 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40AQ8WXH6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40AQ8WXH6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
RAB40AQ8WXH6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.2■□□□□ 0.34
RAB40AQ8WXH6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.2■□□□□ 0.34
RAB40AQ8WXH6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40AQ8WXH6 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40AQ8WXH6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40AQ8WXH6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB40AQ8WXH6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40AQ8WXH6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40AQ8WXH6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.19■□□□□ 0.34
RAB40AQ8WXH6 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40AQ8WXH6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RAB40AQ8WXH6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40AQ8WXH6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40AQ8WXH6 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40AQ8WXH6 AL512625.2-201ENST00000417533 625 ntBASIC17.19■□□□□ 0.34
RAB40AQ8WXH6 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RAB40AQ8WXH6 GUSBP6-202ENST00000438529 1198 ntBASIC17.19■□□□□ 0.34
RAB40AQ8WXH6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB40AQ8WXH6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB40AQ8WXH6 AC142086.2-201ENST00000569753 217 ntBASIC17.19■□□□□ 0.34
RAB40AQ8WXH6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.19■□□□□ 0.34
RAB40AQ8WXH6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RAB40AQ8WXH6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40AQ8WXH6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40AQ8WXH6 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RAB40AQ8WXH6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms