Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CNIH3Q8TBE1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.92■□□□□ 0.46
CNIH3Q8TBE1 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNIH3Q8TBE1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNIH3Q8TBE1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNIH3Q8TBE1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNIH3Q8TBE1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.92■□□□□ 0.46
CNIH3Q8TBE1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.92■□□□□ 0.46
CNIH3Q8TBE1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.92■□□□□ 0.46
CNIH3Q8TBE1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.92■□□□□ 0.46
CNIH3Q8TBE1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNIH3Q8TBE1 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNIH3Q8TBE1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CNIH3Q8TBE1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.92■□□□□ 0.46
CNIH3Q8TBE1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNIH3Q8TBE1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNIH3Q8TBE1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNIH3Q8TBE1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNIH3Q8TBE1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNIH3Q8TBE1 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CNIH3Q8TBE1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.92■□□□□ 0.46
CNIH3Q8TBE1 AP001271.2-201ENST00000624018 1556 ntBASIC17.91■□□□□ 0.46
CNIH3Q8TBE1 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNIH3Q8TBE1 PTBP1P-201ENST00000554374 1601 ntBASIC17.91■□□□□ 0.46
CNIH3Q8TBE1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.91■□□□□ 0.46
CNIH3Q8TBE1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CNIH3Q8TBE1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CNIH3Q8TBE1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNIH3Q8TBE1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNIH3Q8TBE1 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNIH3Q8TBE1 AC079598.2-202ENST00000546624 1451 ntBASIC17.91■□□□□ 0.46
CNIH3Q8TBE1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
CNIH3Q8TBE1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.91■□□□□ 0.46
CNIH3Q8TBE1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
CNIH3Q8TBE1 AC105265.2-201ENST00000467189 838 ntBASIC17.91■□□□□ 0.46
CNIH3Q8TBE1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.91■□□□□ 0.46
CNIH3Q8TBE1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.91■□□□□ 0.46
CNIH3Q8TBE1 AL356652.1-201ENST00000615962 565 ntBASIC17.91■□□□□ 0.46
CNIH3Q8TBE1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.91■□□□□ 0.46
CNIH3Q8TBE1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.91■□□□□ 0.46
CNIH3Q8TBE1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNIH3Q8TBE1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNIH3Q8TBE1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CNIH3Q8TBE1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNIH3Q8TBE1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNIH3Q8TBE1 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNIH3Q8TBE1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNIH3Q8TBE1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.9■□□□□ 0.46
CNIH3Q8TBE1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNIH3Q8TBE1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNIH3Q8TBE1 RBM17P2-201ENST00000616397 1405 ntBASIC17.9■□□□□ 0.46
CNIH3Q8TBE1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNIH3Q8TBE1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNIH3Q8TBE1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CNIH3Q8TBE1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
CNIH3Q8TBE1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.9■□□□□ 0.46
CNIH3Q8TBE1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNIH3Q8TBE1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.9■□□□□ 0.46
CNIH3Q8TBE1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.9■□□□□ 0.46
CNIH3Q8TBE1 DUX4L2-201ENST00000561772 1275 ntBASIC17.9■□□□□ 0.46
CNIH3Q8TBE1 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.9■□□□□ 0.46
CNIH3Q8TBE1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.9■□□□□ 0.46
CNIH3Q8TBE1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CNIH3Q8TBE1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.9■□□□□ 0.46
CNIH3Q8TBE1 DUX4L6-201ENST00000626483 1275 ntBASIC17.9■□□□□ 0.46
CNIH3Q8TBE1 DUX4L1-201ENST00000627662 1275 ntBASIC17.9■□□□□ 0.46
CNIH3Q8TBE1 DUX4L8-201ENST00000629013 1275 ntBASIC17.9■□□□□ 0.46
CNIH3Q8TBE1 DUX4L3-201ENST00000630187 1275 ntBASIC17.9■□□□□ 0.46
CNIH3Q8TBE1 DUX4L7-201ENST00000630678 1275 ntBASIC17.9■□□□□ 0.46
CNIH3Q8TBE1 DUX4L5-201ENST00000630834 1275 ntBASIC17.9■□□□□ 0.46
CNIH3Q8TBE1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CNIH3Q8TBE1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNIH3Q8TBE1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNIH3Q8TBE1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNIH3Q8TBE1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CNIH3Q8TBE1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CNIH3Q8TBE1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNIH3Q8TBE1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CNIH3Q8TBE1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CNIH3Q8TBE1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CNIH3Q8TBE1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
CNIH3Q8TBE1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CNIH3Q8TBE1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.89■□□□□ 0.46
CNIH3Q8TBE1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
CNIH3Q8TBE1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNIH3Q8TBE1 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNIH3Q8TBE1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNIH3Q8TBE1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNIH3Q8TBE1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms