Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LMO3Q8TAP4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
LMO3Q8TAP4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
LMO3Q8TAP4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LMO3Q8TAP4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
LMO3Q8TAP4 YBX1P10-201ENST00000444752 975 ntBASIC21.07■□□□□ 0.96
LMO3Q8TAP4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.07■□□□□ 0.96
LMO3Q8TAP4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
LMO3Q8TAP4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
LMO3Q8TAP4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.07■□□□□ 0.96
LMO3Q8TAP4 AC233263.1-201ENST00000578059 224 ntBASIC21.07■□□□□ 0.96
LMO3Q8TAP4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.07■□□□□ 0.96
LMO3Q8TAP4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LMO3Q8TAP4 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.07■□□□□ 0.96
LMO3Q8TAP4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
LMO3Q8TAP4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
LMO3Q8TAP4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
LMO3Q8TAP4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LMO3Q8TAP4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LMO3Q8TAP4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.06■□□□□ 0.96
LMO3Q8TAP4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
LMO3Q8TAP4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LMO3Q8TAP4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.06■□□□□ 0.96
LMO3Q8TAP4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
LMO3Q8TAP4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.06■□□□□ 0.96
LMO3Q8TAP4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LMO3Q8TAP4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
LMO3Q8TAP4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.06■□□□□ 0.96
LMO3Q8TAP4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LMO3Q8TAP4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LMO3Q8TAP4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LMO3Q8TAP4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.06■□□□□ 0.96
LMO3Q8TAP4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.06■□□□□ 0.96
LMO3Q8TAP4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LMO3Q8TAP4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LMO3Q8TAP4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LMO3Q8TAP4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
LMO3Q8TAP4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LMO3Q8TAP4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LMO3Q8TAP4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.06■□□□□ 0.96
LMO3Q8TAP4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.06■□□□□ 0.96
LMO3Q8TAP4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
LMO3Q8TAP4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LMO3Q8TAP4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LMO3Q8TAP4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LMO3Q8TAP4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.05■□□□□ 0.96
LMO3Q8TAP4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LMO3Q8TAP4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
LMO3Q8TAP4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LMO3Q8TAP4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
LMO3Q8TAP4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LMO3Q8TAP4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LMO3Q8TAP4 KRT18P16-201ENST00000510337 1294 ntBASIC21.05■□□□□ 0.96
LMO3Q8TAP4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.05■□□□□ 0.96
LMO3Q8TAP4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LMO3Q8TAP4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LMO3Q8TAP4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.05■□□□□ 0.96
LMO3Q8TAP4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LMO3Q8TAP4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LMO3Q8TAP4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.05■□□□□ 0.96
LMO3Q8TAP4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.05■□□□□ 0.96
LMO3Q8TAP4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LMO3Q8TAP4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LMO3Q8TAP4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LMO3Q8TAP4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.05■□□□□ 0.96
LMO3Q8TAP4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LMO3Q8TAP4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LMO3Q8TAP4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LMO3Q8TAP4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
LMO3Q8TAP4 AL032819.2-201ENST00000624543 2162 ntBASIC21.04■□□□□ 0.96
LMO3Q8TAP4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LMO3Q8TAP4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.04■□□□□ 0.96
LMO3Q8TAP4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
LMO3Q8TAP4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.04■□□□□ 0.96
LMO3Q8TAP4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LMO3Q8TAP4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LMO3Q8TAP4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LMO3Q8TAP4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.04■□□□□ 0.96
LMO3Q8TAP4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.04■□□□□ 0.96
LMO3Q8TAP4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.04■□□□□ 0.96
LMO3Q8TAP4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.04■□□□□ 0.96
LMO3Q8TAP4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
LMO3Q8TAP4 MTDHP1-201ENST00000605323 784 ntBASIC21.04■□□□□ 0.96
LMO3Q8TAP4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.04■□□□□ 0.96
LMO3Q8TAP4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LMO3Q8TAP4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LMO3Q8TAP4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
LMO3Q8TAP4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LMO3Q8TAP4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.04■□□□□ 0.96
LMO3Q8TAP4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LMO3Q8TAP4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LMO3Q8TAP4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LMO3Q8TAP4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LMO3Q8TAP4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
LMO3Q8TAP4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LMO3Q8TAP4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LMO3Q8TAP4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LMO3Q8TAP4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.03■□□□□ 0.96
LMO3Q8TAP4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LMO3Q8TAP4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms