Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCNYL1Q8N7R7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCNYL1Q8N7R7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCNYL1Q8N7R7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.36■□□□□ 0.69
CCNYL1Q8N7R7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCNYL1Q8N7R7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCNYL1Q8N7R7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CCNYL1Q8N7R7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCNYL1Q8N7R7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.36■□□□□ 0.69
CCNYL1Q8N7R7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.36■□□□□ 0.69
CCNYL1Q8N7R7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCNYL1Q8N7R7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCNYL1Q8N7R7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CCNYL1Q8N7R7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCNYL1Q8N7R7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCNYL1Q8N7R7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCNYL1Q8N7R7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCNYL1Q8N7R7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCNYL1Q8N7R7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCNYL1Q8N7R7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCNYL1Q8N7R7 CYP2T1P-201ENST00000432607 1285 ntBASIC19.35■□□□□ 0.69
CCNYL1Q8N7R7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.35■□□□□ 0.69
CCNYL1Q8N7R7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.35■□□□□ 0.69
CCNYL1Q8N7R7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.35■□□□□ 0.69
CCNYL1Q8N7R7 PHGDH-210ENST00000641115 1638 ntBASIC19.35■□□□□ 0.69
CCNYL1Q8N7R7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CCNYL1Q8N7R7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCNYL1Q8N7R7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.35■□□□□ 0.69
CCNYL1Q8N7R7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCNYL1Q8N7R7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.35■□□□□ 0.69
CCNYL1Q8N7R7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CCNYL1Q8N7R7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.34■□□□□ 0.69
CCNYL1Q8N7R7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCNYL1Q8N7R7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCNYL1Q8N7R7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCNYL1Q8N7R7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCNYL1Q8N7R7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCNYL1Q8N7R7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.34■□□□□ 0.69
CCNYL1Q8N7R7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.34■□□□□ 0.69
CCNYL1Q8N7R7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.34■□□□□ 0.69
CCNYL1Q8N7R7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.34■□□□□ 0.69
CCNYL1Q8N7R7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.34■□□□□ 0.69
CCNYL1Q8N7R7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCNYL1Q8N7R7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.34■□□□□ 0.69
CCNYL1Q8N7R7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CCNYL1Q8N7R7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCNYL1Q8N7R7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.34■□□□□ 0.69
CCNYL1Q8N7R7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCNYL1Q8N7R7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.34■□□□□ 0.69
CCNYL1Q8N7R7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCNYL1Q8N7R7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CCNYL1Q8N7R7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCNYL1Q8N7R7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
CCNYL1Q8N7R7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
CCNYL1Q8N7R7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCNYL1Q8N7R7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCNYL1Q8N7R7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.69
CCNYL1Q8N7R7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
CCNYL1Q8N7R7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCNYL1Q8N7R7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCNYL1Q8N7R7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.33■□□□□ 0.69
CCNYL1Q8N7R7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCNYL1Q8N7R7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
CCNYL1Q8N7R7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCNYL1Q8N7R7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCNYL1Q8N7R7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCNYL1Q8N7R7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.33■□□□□ 0.68
CCNYL1Q8N7R7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.33■□□□□ 0.68
CCNYL1Q8N7R7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.33■□□□□ 0.68
CCNYL1Q8N7R7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCNYL1Q8N7R7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCNYL1Q8N7R7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCNYL1Q8N7R7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCNYL1Q8N7R7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CCNYL1Q8N7R7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCNYL1Q8N7R7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCNYL1Q8N7R7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCNYL1Q8N7R7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.33■□□□□ 0.68
CCNYL1Q8N7R7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCNYL1Q8N7R7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCNYL1Q8N7R7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.32■□□□□ 0.68
CCNYL1Q8N7R7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CCNYL1Q8N7R7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCNYL1Q8N7R7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CCNYL1Q8N7R7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCNYL1Q8N7R7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCNYL1Q8N7R7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCNYL1Q8N7R7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCNYL1Q8N7R7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCNYL1Q8N7R7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCNYL1Q8N7R7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CCNYL1Q8N7R7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CCNYL1Q8N7R7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCNYL1Q8N7R7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCNYL1Q8N7R7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.32■□□□□ 0.68
CCNYL1Q8N7R7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.32■□□□□ 0.68
CCNYL1Q8N7R7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCNYL1Q8N7R7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCNYL1Q8N7R7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCNYL1Q8N7R7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms