Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
FOXR1Q6PIV2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXR1Q6PIV2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXR1Q6PIV2 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
FOXR1Q6PIV2 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
FOXR1Q6PIV2 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXR1Q6PIV2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
FOXR1Q6PIV2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.38■□□□□ 0.85
FOXR1Q6PIV2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.38■□□□□ 0.85
FOXR1Q6PIV2 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
FOXR1Q6PIV2 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.38■□□□□ 0.85
FOXR1Q6PIV2 MIR4758-201ENST00000577688 71 ntBASIC20.38■□□□□ 0.85
FOXR1Q6PIV2 AC013268.1-206ENST00000638368 961 ntBASIC20.38■□□□□ 0.85
FOXR1Q6PIV2 AC112229.1-201ENST00000639295 961 ntBASIC20.38■□□□□ 0.85
FOXR1Q6PIV2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
FOXR1Q6PIV2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
FOXR1Q6PIV2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXR1Q6PIV2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.38■□□□□ 0.85
FOXR1Q6PIV2 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXR1Q6PIV2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.38■□□□□ 0.85
FOXR1Q6PIV2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
FOXR1Q6PIV2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXR1Q6PIV2 MKRN4P-201ENST00000444706 1521 ntBASIC20.37■□□□□ 0.85
FOXR1Q6PIV2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
FOXR1Q6PIV2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
FOXR1Q6PIV2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FOXR1Q6PIV2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXR1Q6PIV2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.37■□□□□ 0.85
FOXR1Q6PIV2 TREX1-205ENST00000625293 1783 ntBASIC20.37■□□□□ 0.85
FOXR1Q6PIV2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXR1Q6PIV2 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.37■□□□□ 0.85
FOXR1Q6PIV2 KRT18P29-201ENST00000397031 1267 ntBASIC20.37■□□□□ 0.85
FOXR1Q6PIV2 CYP2T1P-201ENST00000432607 1285 ntBASIC20.37■□□□□ 0.85
FOXR1Q6PIV2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FOXR1Q6PIV2 TERF1P5-201ENST00000477545 1207 ntBASIC20.37■□□□□ 0.85
FOXR1Q6PIV2 AC093827.2-201ENST00000512654 315 ntBASIC20.37■□□□□ 0.85
FOXR1Q6PIV2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
FOXR1Q6PIV2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXR1Q6PIV2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXR1Q6PIV2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FOXR1Q6PIV2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
FOXR1Q6PIV2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
FOXR1Q6PIV2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FOXR1Q6PIV2 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FOXR1Q6PIV2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXR1Q6PIV2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXR1Q6PIV2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
FOXR1Q6PIV2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FOXR1Q6PIV2 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.37■□□□□ 0.85
FOXR1Q6PIV2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXR1Q6PIV2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.36■□□□□ 0.85
FOXR1Q6PIV2 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
FOXR1Q6PIV2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXR1Q6PIV2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.36■□□□□ 0.85
FOXR1Q6PIV2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
FOXR1Q6PIV2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
FOXR1Q6PIV2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
FOXR1Q6PIV2 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXR1Q6PIV2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.36■□□□□ 0.85
FOXR1Q6PIV2 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXR1Q6PIV2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
FOXR1Q6PIV2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.36■□□□□ 0.85
FOXR1Q6PIV2 AL390961.4-201ENST00000623958 2535 ntBASIC20.36■□□□□ 0.85
FOXR1Q6PIV2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
FOXR1Q6PIV2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.36■□□□□ 0.85
FOXR1Q6PIV2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.36■□□□□ 0.85
FOXR1Q6PIV2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
FOXR1Q6PIV2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXR1Q6PIV2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
FOXR1Q6PIV2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
FOXR1Q6PIV2 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXR1Q6PIV2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.35■□□□□ 0.85
FOXR1Q6PIV2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXR1Q6PIV2 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
FOXR1Q6PIV2 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.35■□□□□ 0.85
FOXR1Q6PIV2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
FOXR1Q6PIV2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXR1Q6PIV2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXR1Q6PIV2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.35■□□□□ 0.85
FOXR1Q6PIV2 MIPEPP3-201ENST00000412105 444 ntBASIC20.35■□□□□ 0.85
FOXR1Q6PIV2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXR1Q6PIV2 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.35■□□□□ 0.85
FOXR1Q6PIV2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.35■□□□□ 0.85
FOXR1Q6PIV2 AC008687.6-201ENST00000596318 630 ntBASIC20.35■□□□□ 0.85
FOXR1Q6PIV2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
FOXR1Q6PIV2 AC008694.1-202ENST00000636953 945 ntBASIC20.35■□□□□ 0.85
FOXR1Q6PIV2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
FOXR1Q6PIV2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXR1Q6PIV2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
FOXR1Q6PIV2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXR1Q6PIV2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXR1Q6PIV2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.35■□□□□ 0.85
FOXR1Q6PIV2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
FOXR1Q6PIV2 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXR1Q6PIV2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
FOXR1Q6PIV2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
FOXR1Q6PIV2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.35■□□□□ 0.85
FOXR1Q6PIV2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXR1Q6PIV2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXR1Q6PIV2 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms