Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.35■□□□□ 0.37
PCGF3Q3KNV8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCGF3Q3KNV8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PCGF3Q3KNV8 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCGF3Q3KNV8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCGF3Q3KNV8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCGF3Q3KNV8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.35■□□□□ 0.37
PCGF3Q3KNV8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.35■□□□□ 0.37
PCGF3Q3KNV8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PCGF3Q3KNV8 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCGF3Q3KNV8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCGF3Q3KNV8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCGF3Q3KNV8 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCGF3Q3KNV8 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCGF3Q3KNV8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCGF3Q3KNV8 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCGF3Q3KNV8 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCGF3Q3KNV8 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCGF3Q3KNV8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCGF3Q3KNV8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCGF3Q3KNV8 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCGF3Q3KNV8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCGF3Q3KNV8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.34■□□□□ 0.37
PCGF3Q3KNV8 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.34■□□□□ 0.37
PCGF3Q3KNV8 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.34■□□□□ 0.37
PCGF3Q3KNV8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.34■□□□□ 0.37
PCGF3Q3KNV8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCGF3Q3KNV8 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
PCGF3Q3KNV8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCGF3Q3KNV8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCGF3Q3KNV8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCGF3Q3KNV8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCGF3Q3KNV8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCGF3Q3KNV8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCGF3Q3KNV8 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.33■□□□□ 0.37
PCGF3Q3KNV8 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCGF3Q3KNV8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.33■□□□□ 0.37
PCGF3Q3KNV8 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.33■□□□□ 0.37
PCGF3Q3KNV8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.33■□□□□ 0.37
PCGF3Q3KNV8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCGF3Q3KNV8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCGF3Q3KNV8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCGF3Q3KNV8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCGF3Q3KNV8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.33■□□□□ 0.36
PCGF3Q3KNV8 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.33■□□□□ 0.36
PCGF3Q3KNV8 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.33■□□□□ 0.36
PCGF3Q3KNV8 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.33■□□□□ 0.36
PCGF3Q3KNV8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.33■□□□□ 0.36
PCGF3Q3KNV8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.33■□□□□ 0.36
PCGF3Q3KNV8 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCGF3Q3KNV8 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCGF3Q3KNV8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.33■□□□□ 0.36
PCGF3Q3KNV8 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.33■□□□□ 0.36
PCGF3Q3KNV8 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.33■□□□□ 0.36
PCGF3Q3KNV8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.33■□□□□ 0.36
PCGF3Q3KNV8 AC083880.1-201ENST00000608266 535 ntBASIC17.33■□□□□ 0.36
PCGF3Q3KNV8 AL356652.1-201ENST00000615962 565 ntBASIC17.33■□□□□ 0.36
PCGF3Q3KNV8 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.33■□□□□ 0.36
PCGF3Q3KNV8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCGF3Q3KNV8 AC005332.7-201ENST00000614046 2005 ntBASIC17.33■□□□□ 0.36
PCGF3Q3KNV8 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF3Q3KNV8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF3Q3KNV8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF3Q3KNV8 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF3Q3KNV8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.32■□□□□ 0.36
PCGF3Q3KNV8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PCGF3Q3KNV8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.32■□□□□ 0.36
PCGF3Q3KNV8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF3Q3KNV8 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF3Q3KNV8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.32■□□□□ 0.36
PCGF3Q3KNV8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF3Q3KNV8 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF3Q3KNV8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF3Q3KNV8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.32■□□□□ 0.36
PCGF3Q3KNV8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.32■□□□□ 0.36
PCGF3Q3KNV8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.32■□□□□ 0.36
PCGF3Q3KNV8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF3Q3KNV8 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF3Q3KNV8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF3Q3KNV8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.32■□□□□ 0.36
PCGF3Q3KNV8 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF3Q3KNV8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF3Q3KNV8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF3Q3KNV8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCGF3Q3KNV8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms