Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SLC25A1P53007 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC25A1P53007 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SLC25A1P53007 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SLC25A1P53007 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC25A1P53007 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC25A1P53007 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC25A1P53007 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SLC25A1P53007 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC25A1P53007 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC25A1P53007 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.44■□□□□ 0.38
SLC25A1P53007 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.44■□□□□ 0.38
SLC25A1P53007 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
SLC25A1P53007 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.44■□□□□ 0.38
SLC25A1P53007 AC080038.1-201ENST00000611274 1154 ntBASIC17.44■□□□□ 0.38
SLC25A1P53007 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.44■□□□□ 0.38
SLC25A1P53007 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.44■□□□□ 0.38
SLC25A1P53007 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC25A1P53007 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC25A1P53007 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC25A1P53007 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC25A1P53007 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC25A1P53007 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC25A1P53007 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SLC25A1P53007 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC25A1P53007 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC25A1P53007 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC25A1P53007 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SLC25A1P53007 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC25A1P53007 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC25A1P53007 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC25A1P53007 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC25A1P53007 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SLC25A1P53007 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC25A1P53007 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.43■□□□□ 0.38
SLC25A1P53007 AF201337.1-201ENST00000520239 748 ntBASIC17.43■□□□□ 0.38
SLC25A1P53007 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.43■□□□□ 0.38
SLC25A1P53007 AC105036.2-201ENST00000569468 176 ntBASIC17.43■□□□□ 0.38
SLC25A1P53007 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC25A1P53007 AC073111.5-205ENST00000641717 521 ntBASIC17.43■□□□□ 0.38
SLC25A1P53007 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SLC25A1P53007 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.43■□□□□ 0.38
SLC25A1P53007 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC25A1P53007 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC25A1P53007 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC25A1P53007 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
SLC25A1P53007 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SLC25A1P53007 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC25A1P53007 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC25A1P53007 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC25A1P53007 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC25A1P53007 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC25A1P53007 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SLC25A1P53007 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC25A1P53007 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC25A1P53007 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC25A1P53007 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.42■□□□□ 0.38
SLC25A1P53007 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC25A1P53007 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC25A1P53007 AL390719.1-204ENST00000412397 1219 ntBASIC17.42■□□□□ 0.38
SLC25A1P53007 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC25A1P53007 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC25A1P53007 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.42■□□□□ 0.38
SLC25A1P53007 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
SLC25A1P53007 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.42■□□□□ 0.38
SLC25A1P53007 AC005829.2-201ENST00000571422 1056 ntBASIC17.42■□□□□ 0.38
SLC25A1P53007 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC25A1P53007 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC25A1P53007 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC25A1P53007 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SLC25A1P53007 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
SLC25A1P53007 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC25A1P53007 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SLC25A1P53007 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC25A1P53007 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC25A1P53007 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC25A1P53007 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC25A1P53007 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.41■□□□□ 0.38
SLC25A1P53007 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SLC25A1P53007 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC25A1P53007 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC25A1P53007 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC25A1P53007 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC25A1P53007 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SLC25A1P53007 BX276092.2-201ENST00000417668 665 ntBASIC17.41■□□□□ 0.38
SLC25A1P53007 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.41■□□□□ 0.38
SLC25A1P53007 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC25A1P53007 AL050303.2-201ENST00000619798 666 ntBASIC17.41■□□□□ 0.38
SLC25A1P53007 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
SLC25A1P53007 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC25A1P53007 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC25A1P53007 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.41■□□□□ 0.38
SLC25A1P53007 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC25A1P53007 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC25A1P53007 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC25A1P53007 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC25A1P53007 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC25A1P53007 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
SLC25A1P53007 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SLC25A1P53007 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms